Assay development and screening of inhibitors targeting the SARS-CoV-2 2'-O-methyltransferase NSP16

Mengtong Cao1, Carl W Trieshmann1, Subodh Kumar Samrat2

  • 1Department of Pharmaceutical and Biomedical Sciences, College of Pharmacy, University of Georgia, Athens, GA, United States.

PubMed

Insights

Researchers identified novel small molecule inhibitors targeting the SARS-CoV-2 NSP16/NSP10 enzyme complex, crucial for viral replication and immune evasion. These findings pave the way for developing new antiviral therapies against COVID-19 and related coronaviruses.

Area of Science:

  • Virology
  • Drug Discovery
  • Biochemistry

Background:

  • The COVID-19 pandemic, caused by SARS-CoV-2, necessitates new therapeutic strategies beyond vaccines.
  • The viral NSP16/NSP10 complex is essential for SARS-CoV-2 replication and immune evasion by mediating mRNA 5'-capping.
  • NSP16/NSP10 represents a promising target for developing novel antiviral treatments.

Purpose of the Study:

  • To discover small molecule inhibitors targeting the SARS-CoV-2 NSP16/NSP10 enzyme complex.
  • To utilize structural insights and combined virtual and experimental screening methods.
  • To lay the groundwork for developing new antiviral therapeutics.

Main Methods:

  • Employed molecular docking for virtual screening to identify candidate compounds.
  • Developed a scintillation proximity assay for biochemical testing of NSP16/NSP10 enzymatic activity.
  • Screened hit compounds from virtual screening using the developed assay.

Main Results:

  • Identified potential small molecule inhibitors that effectively inhibit NSP16 activity.
  • Confirmed cellular efficacy of the identified inhibitor candidates.
  • Performed structural analysis and chemotype categorization of the hits.

Conclusions:

  • The study successfully identified novel inhibitors of the SARS-CoV-2 NSP16/NSP10 complex.
  • These inhibitors demonstrate potential for therapeutic development against SARS-CoV-2.
  • The findings provide a foundation for future antiviral drug discovery efforts for coronaviruses.