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Updated: Jan 22, 2026

Coral Reef Arks: An In Situ Mesocosm and Toolkit for Assembling Reef Communities
Published on: January 6, 2023
Mitochondrial genomic datasets for 32 coral reef decapods from the Okinawa Archipelago
Yuki Yoshioka1, Megumi Kanai2, Takashi Nagai2
1Marine Genomics Unit, Okinawa Institute of Science and Technology, Onna, Okinawa 904-0495, Japan.
Abstract:
The Decapoda is a large order of crustaceans, comprising more than 17,000 extant species. Since the advent of next-generation sequencing, which provides high resolution and coverage, it has become significantly faster and more cost-effective to sequence entire mitochondrial genomes. Here, we present mitochondrial genome sequences of 32 coral reef decapods, representing 10 families (Alpheidae, Galatheidae, Hippolytidae, Palaemonidae, Portunidae, Spongicolidae, Tetraliidae, Thoridae, Trapeziidae, and Xanthidae) in four infraorders (Anomura, Brachyura, Caridea, and Stenopodidea). These genomic data significantly expand decapod representation in databases that support DNA metabarcoding and related technologies.
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