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Updated: Jan 22, 2026

Profiling Sensitivity to Targeted Therapies in EGFR-Mutant NSCLC Patient-Derived Organoids
Published on: November 22, 2021
From class effects to specificity FAERS evidence and network mapping of adverse events in NSCLC targeted therapy
Jinsheng Yu1,2, Minqi Zhu1,2, Yiwen Zhu1,2
1Department of Oncology, The First Affiliated Hospital of Zhejiang Chinese Medical University (Zhejiang Provincial Hospital of Traditional Chinese Medicine), Hangzhou, Zhejiang, China.
Background:
Whether targeted therapies for non-small cell lung cancer (NSCLC) share mechanism-driven class toxicities or mainly exhibit drug-specific risks remains unclear in real-world practice.
Methods:
We analyzed reports from the U.S. FDA Adverse Event Reporting System (FAERS, 2004-2025) for 14 Food and Drug Administration (FDA)-approved agents across five classes: EGFR, ALK, ROS1, RET tyrosine kinase inhibitors (TKIs), and a KRAS G12C inhibitor. Adverse events (AEs) were standardized to MedDRA v27.0 preferred terms (PTs). Primary PT-level safety signals were defined based on concordance across four disproportionality methods: proportional reporting ratio (PRR; PRR ≥ 2, x2 ≥ 4, and ≥3 reports), reporting odds ratio (ROR; lower 95% confidence interval bound ROR025 > 1), Bayesian confidence propagation neural network (BCPNN; IC025 > 0), and the multi-item gamma Poisson shrinker (MGPS; EB05 ≥ 2). Cross-drug structure was evaluated via a Jaccard-based similarity network.
Results:
Among 34 948 individuals, per-drug signal counts ranged from 3 to 113. EGFR-TKIs were enriched for mucocutaneous and gastrointestinal events; ALK-TKIs for metabolic and laboratory abnormalities and selected cardiac findings; and RET-TKIs for hepatotoxicity and hypertension. Osimertinib showed prominent electrocardiographic signals (e.g., QT prolongation); lorlatinib exhibited a distinctive dyslipidemia signature. Brigatinib and crizotinib aligned with creatine kinase elevation and visual effects, respectively. No single PT occurred across all 14 drugs. Recurrent cross-class PTs included increased blood pressure, QT prolongation, dry skin, and edema. The similarity network revealed tight within-class modules (EGFR, ALK), a binary RET pair, and peripheral placement of repotrectinib and adagrasib, indicating limited overlap of their AE profiles.
Conclusion:
This first NSCLC-focused FAERS comparison integrating four-method signal detection with network analysis delineates reproducible class effects superimposed by drug-specific toxicities. Findings support tailored monitoring (e.g., dermatologic care for EGFR-TKIs; ECG/electrolytes for osimertinib; lipid/CK surveillance for ALK-TKIs; blood pressure/liver testing for RET-TKIs) to inform risk-aware first-line decisions.
Insights
Targeted therapies for non-small cell lung cancer (NSCLC) show both class-specific and drug-specific toxicities. This analysis of FDA data supports tailored monitoring for patients receiving these critical treatments.
Area of Science:
- Oncology
- Pharmacovigilance
- Clinical Pharmacology
Background:
- Real-world data on class toxicities of targeted therapies for non-small cell lung cancer (NSCLC) is limited.
- Understanding shared mechanisms versus drug-specific risks is crucial for patient safety.
Purpose of the Study:
- To analyze adverse event (AE) profiles of FDA-approved targeted therapies for NSCLC.
- To identify potential class-specific and drug-specific toxicities using real-world data.
- To inform risk-aware treatment decisions and monitoring strategies.
Main Methods:
- Analysis of U.S. FDA Adverse Event Reporting System (FAERS) data (2004-2025) for 14 NSCLC targeted agents across five classes (EGFR, ALK, ROS1, RET TKIs, KRAS G12C inhibitor).
- Standardization of AEs to MedDRA preferred terms (PTs).
- Application of four disproportionality methods (PRR, ROR, BCPNN, MGPS) for signal detection and a Jaccard-based network for cross-drug similarity analysis.
Main Results:
- Significant AE signals identified for EGFR-TKIs (mucocutaneous, GI), ALK-TKIs (metabolic, cardiac), and RET-TKIs (hepatotoxicity, hypertension).
- Specific drugs like osimertinib (ECG) and lorlatinib (dyslipidemia) showed unique AE signatures.
- Recurrent cross-class AEs included hypertension, QT prolongation, dry skin, and edema, but no single AE occurred across all drugs.
Conclusions:
- This study delineates reproducible class effects and drug-specific toxicities for NSCLC targeted therapies.
- Findings support the need for tailored patient monitoring based on drug class and specific agent.
- Results can inform risk-benefit assessments and guide first-line treatment decisions in NSCLC.
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