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Updated: Jan 23, 2026

Mapping Dysfunctional Protein-Protein Interactions in Disease
Published on: October 24, 2025
Structural Destabilization of FRMD3 by a FERM Domain Mutation Causes Hypomyelinating Disease via Oligodendrocyte
Diksha1, Abhishek Kumar2, Smita Saha3
1All India Institute of Medical Sciences, Rishikesh 249203, India.
Abstract:
Hypomyelinating diseases are a heterogeneous group of neurodevelopmental disorders caused by genetic anomalies that impair myelin formation or maintenance. Here, we investigate a novel homozygous missense variant in FRMD3 (NM_174938.6:c.898T > C; p.C300R) in a 2-year-old male presenting with global developmental delay, hypotonia, mild ataxia, and MRI features consistent with hypomyelination. The variant affects a highly conserved cysteine within the FERM domain of FRMD3, and predicted to be deleterious by multiple in silico tools. Molecular dynamics simulations and biophysical analyses revealed that p.C300R introduces steric clashes with neighboring residues, destabilizes the FERM domain, increases structural disorder, and exposes hydrophobic aggregation-prone regions. In proband fibroblasts and nonproband neuronal cells, mutant FRMD3 mislocalized from the plasma membrane to the cytosol, forming large aggregates. Thioflavin T assays confirmed elevated aggregation propensity of the mutant. In oligodendrocytes, FRMD3-p.C300R expression markedly impaired neurite formation and failed to restore proteolipid protein 1 (PLP1) and myelin basic protein (MBP) expression following FRMD3 knockdown, in contrast to wild-type rescue. Interactome and single-cell expression analyses place FRMD3 at membrane-trafficking and lipid-handling hubs in oligodendrocytes and white-matter regions, and loss of these interactions through p.C300R-driven destabilization and aggregation likely underlies the regional hypomyelination observed in the proband. Our findings establish FRMD3 as a novel candidate gene for hypomyelinating disease and reveal that structural destabilization and aggregation of FERM-domain peripheral membrane protein can disrupt oligodendrocyte function and myelin protein expression, leading to neurodevelopmental pathology.
Insights
A novel FRMD3 gene variant causes hypomyelinating disease by destabilizing the protein, leading to aggregation and impaired oligodendrocyte function. This discovery identifies FRMD3 as a new candidate gene for neurodevelopmental disorders.
Area of Science:
- Neurogenetics
- Molecular Biology
- Developmental Neuroscience
Background:
- Hypomyelinating diseases are rare neurodevelopmental disorders impacting myelin formation or maintenance due to genetic factors.
- Identifying the genetic basis of these conditions is crucial for understanding disease mechanisms and developing therapies.
Purpose of the Study:
- To investigate a novel homozygous missense variant in the FRMD3 gene associated with hypomyelinating disease in a pediatric patient.
- To elucidate the molecular mechanisms by which the FRMD3 variant leads to neurodevelopmental pathology.
Main Methods:
- Genetic sequencing to identify the FRMD3 variant (c.898T > C; p.C300R).
- Molecular dynamics simulations and biophysical analyses to assess protein structure and stability.
- Cellular assays (including aggregation studies and FRMD3 rescue experiments in oligodendrocytes) to evaluate protein function.
- Interactome and single-cell expression analyses to map FRMD3's cellular localization and interactions.
Main Results:
- The identified FRMD3 variant (p.C300R) destabilizes the FERM domain, increases protein aggregation, and causes mislocalization in cellular models.
- Mutant FRMD3 impairs oligodendrocyte neurite formation and fails to restore myelin protein expression (PLP1, MBP).
- FRMD3 is implicated in membrane-trafficking and lipid-handling pathways essential for oligodendrocyte function.
Conclusions:
- FRMD3 is a novel candidate gene for hypomyelinating diseases.
- Structural destabilization and aggregation of FRMD3 disrupt oligodendrocyte function, leading to impaired myelin protein expression and regional hypomyelination.
- This study highlights the critical role of protein structural integrity in neurodevelopmental processes.
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