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Clinical characteristics and whole exome sequencing in JAK2V617F- and CALR-unmutated essential thrombocythemia
Siraphop Thammayot1, Patcharawadee Thongkumkoon2, Jeerawan Klangjorhor2
1Division of Hematology, Department of Internal Medicine, Faculty of Medicine, Chiang Mai University, Chiang Mai, Thailand.
Insights
Essential thrombocythemia (ET) patients without JAK2 V617F or CALR mutations are younger and have fewer thrombotic events. Whole-exome sequencing (WES) identified uncommon MPL mutations and potential novel CALR mutations in these ET patients.
Area of Science:
- Hematology
- Oncology
- Genetics
Background:
- Essential thrombocythemia (ET) is a myeloproliferative neoplasm characterized by elevated platelet counts.
- JAK2 V617F and CALR mutations are the most common driver mutations in ET.
- A subset of ET patients remains negative for these mutations, necessitating further investigation into their genetic landscape and clinical characteristics.
Purpose of the Study:
- To characterize the clinical features and outcomes of essential thrombocythemia (ET) patients with JAK2 V617F- and CALR-unmutated status.
- To identify potential driver mutations in this ET subgroup using whole-exome sequencing (WES).
Main Methods:
- A cross-sectional study of 162 ET patients diagnosed between 2007 and 2024.
- Clinical data and outcomes were compared between patients with and without JAK2 V617F and CALR mutations.
- Whole-exome sequencing (WES) was performed on 15 patients with JAK2 V617F- and CALR-unmutated ET.
Main Results:
- 24% (39/162) of ET patients were negative for JAK2 V617F and CALR mutations.
- This subgroup was younger (mean age 53.7 vs. 61.1 years) and had a trend towards lower thrombotic event incidence (5.1% vs. 9.1%) compared to JAK2 V617F-mutated ET.
- WES identified uncommon MPL mutations (e.g., MPL L265F, MPL P70L, MPL R321Q), potential novel CALR mutations, and non-driver mutations including RUNX1 (57.1%).
Conclusions:
- JAK2 V617F- and CALR-unmutated ET patients tend to be diagnosed at a younger age with a lower incidence of thrombosis.
- Whole-exome sequencing (WES) is crucial for detecting uncommon and potential driver mutations in this specific ET subgroup.
- Further research is warranted to elucidate the full spectrum of genetic alterations and their clinical impact in JAK2 V617F- and CALR-unmutated ET.
Objectives:
The aim of this study was to characterize the clinical features and outcomes of patients with JAK2 V617F- and CALR-unmutated essential thrombocythemia (ET) and to identify potential driver mutations through whole-exome sequencing (WES).
Methods:
This was a cross-sectional study including patients diagnosed with ET between 2007 and 2024. Clinical characteristics and outcomes were compared between patients with and without JAK2V617F and CALR mutations. WES was analyzed in JAK2V617F- and CALR-unmutated ET patients.
Results:
Thirty-nine out of 162 ET patients (24%) were JAK2V617F- and CALR-unmutated. This group was younger than patients in the JAK2V617F mutated group (mean age 53.7 vs. 61.1 years, p = 0.012) and had lower incidence of thrombotic events (5.1% vs. 9.1%, p = 0.327). The median overall survival was 13.51 years compared to 12.61 years in patients with JAK2V617F or CALR mutations (p = 0.63). There were no statistically significant differences in clinical symptoms, incidence of thrombosis, bleeding, myelofibrosis, or leukemic transformation. WES was analyzed in 15 patients. Uncommon MPL mutations were identified, including MPLL265F, MPLP70L, and MPLR321Q. Potential novel CALR mutations were detected in exon 5 (c.540C > T, N180 = ) and exon 6 (c.703-3del). Non-driver gene mutations were detected, including RUNX1 (57.1%), ASXL1, DNMT3A, SETBP1, and MSH6.
Discussion And Conclusions:
Patients with JAK2V617F- and CALR-unmutated ET tend to present at a younger age and exhibit a lower incidence of thrombosis compared to those with JAK2V617F-mutated ET. The application of WES enabled the detection of uncommon and potential driver mutations in JAK2V617F- and CALR-unmutated ET.
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