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MS-YieldStackNet: multi-source data fusion for wheat yield estimation using a stacked ensemble neural network.

Waqas Ali1, Zeeshan Ramzan2, Muhammad Shahbaz3

  • 1Department of Computer Science, University of Engineering and Technology Lahore, Lahore, Pakistan.

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|January 22, 2026
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Summary
This summary is machine-generated.

This study introduces MS-YieldStackNet, a novel framework for accurate wheat yield prediction using satellite data and soil analytics. The model enhances food security and agricultural planning in regions like Pakistan.

Keywords:
Artificial intelligenceEnsemble learningFood securityMultimodalRemote sensingYield estimation

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Area of Science:

  • Agricultural Science
  • Remote Sensing
  • Machine Learning

Background:

  • Accurate crop yield prediction is crucial for food security and agricultural policy.
  • Manual estimation methods for wheat yield are labor-intensive and imprecise, especially in Pakistan.
  • Integrating diverse data sources can improve yield forecasting accuracy.

Purpose of the Study:

  • To develop and validate a novel algorithmic framework, MS-YieldStackNet, for high-resolution wheat yield prediction.
  • To integrate multispectral satellite imagery, in-situ soil analytics, and meteorological variables for enhanced forecasting.
  • To assess the model's performance using key statistical metrics.

Main Methods:

  • Constructed a unified feature space using vegetation indices (NDVI, DVI), soil physicochemical attributes, and temporal climate data.
  • Employed a stacked ensemble neural architecture (MS-YieldStackNet) combining three parallel feed-forward neural networks (FFNNs).
  • Utilized a Random Forest meta-learner to integrate predictions from the FFNNs.

Main Results:

  • Achieved a robust R-squared value of 0.81, indicating strong model performance.
  • Reported Mean Squared Error (MSE) of 6,114.30 kg/ha and Root Mean Squared Error (RMSE) of 78.19 kg/ha.
  • Demonstrated low prediction errors with Mean Absolute Error (MAE) of 59.07 kg/ha and Mean Absolute Percentage Error (MAPE) of 3.55%.

Conclusions:

  • MS-YieldStackNet provides a precise and scalable solution for wheat yield forecasting.
  • The integrated approach significantly improves prediction accuracy compared to traditional methods.
  • The framework has strong potential for informing agricultural policy and ensuring food security.