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Updated: Jan 24, 2026

Curation of Computational Chemical Libraries Demonstrated with Alpha-Amino Acids
Published on: April 13, 2022
Outsourcing of energetically costly amino acids at the origin of animals
Niko Kasalo1,2, Mirjana Domazet-Lošo3, Tomislav Domazet-Lošo4,5
1Laboratory of Evolutionary Genetics, Division of Molecular Biology, Ruđer Bošković Institute, Zagreb, Croatia.
Abstract:
Animals are generally capable of synthesizing eleven amino acids, while the remaining nine-often referred to as essential-must be acquired through diet. This metabolic trait profoundly shapes animal ecology and evolutionary trajectories, and recent phylogenomic studies indicate that it arose from gene losses at the root of the animal tree. However, it remains unclear which selective forces, if any, directed this far-reaching metabolic simplification. Here, we show that essential amino acids are energetically far more expensive to synthesize than non-essential ones, particularly under high respiratory conditions-a hallmark of the animal lifestyle. Using a probabilistic selection test, we find support for the hypothesis that energy-related selection, counterbalanced by pleiotropic effects, favored the outsourcing of essential amino acid production under well-oxygenated and nutrient-rich conditions. Remarkably, we also find that extant animals use expensive amino acids more frequently than their closest unicellular relatives, suggesting that constraints on their usage were relaxed once their synthesis was externalized, thereby enabling animal genes to evolve more freely across protein sequence space. In this light, we propose that the origin of animals was tightly linked to energy-related adaptations rather than to unpredictable stochastic events, as recently suggested.
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