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Published on: November 12, 2015
Viral diversity influences T-cell responses to enteric human adenoviruses F40 and F41
Holly M Craven1,2, Jennifer P Hoang1, Rookmini Mukhopadhyay1
1Department of Genetics, Downing Street, University of Cambridge, Cambridge, CB2 3EH, United Kingdom.
Insights
Human enteric adenoviruses (HAdV-F) evolve to evade immune responses. This study identifies conserved T-cell epitopes in HAdV-F capsid proteins, crucial for understanding viral evolution and designing new vaccines.
Area of Science:
- Immunology
- Virology
- Genomics
Background:
- Human enteric species F adenoviruses (HAdV-F) cause significant pediatric illness globally.
- Cellular immune responses, including cytotoxic T cells and cytokines, are vital for controlling HAdV-F infections.
- HAdV-F capsid proteins (hexon, penton) may evolve to evade host immune detection.
Purpose of the Study:
- To investigate the evolution of HAdV-F capsid proteins (hexon and penton) in response to cellular immunity.
- To predict and analyze Major Histocompatibility Complex (MHC) binding epitopes within HAdV-F proteins.
- To assess the immunogenicity of predicted T-cell epitopes from emergent HAdV-F strains.
Main Methods:
- Global HAdV genomic data analysis to predict MHC Class I peptide binding in hexon and penton proteins.
- Focus on MHC Class I alleles prevalent in the UK and Kenya to identify epitopes.
- Synthesis and testing of F41 hexon peptides for interferon gamma (IFN-γ) responses in healthy donor peripheral blood mononuclear cells (PBMCs).
Main Results:
- Identification of shared and genotype-specific MHC Class I epitopes across HAdV species C and F.
- Confirmation of ubiquitous IFN-γ and Interleukin-2 (IL-2) responses to HAdV-F in healthy adults.
- Significant IFN-γ responses observed in PBMCs against 11 out of 16 predicted F41 hexon epitopes.
Conclusions:
- HAdV-F-40 and F41 hexon and penton proteins possess conserved, genotype-specific Class I epitopes with potential for vaccine development.
- Emergent HAdV-F strains contain T-cell epitopes capable of eliciting inflammatory cytokine responses.
- Further research into T-cell recognition's role in enteric adenovirus evolution is warranted.
Background:
Human enteric species F adenoviruses are a leading cause of diarrhoea-associated paediatric morbidity and mortality worldwide. The cellular immune response (antigen-specific cytotoxic T cells and secreted cytokines) to human adenovirus (HAdV) infection is known to ameliorate symptoms and is critical for viral clearance. We hypothesized that the capsid proteins (hexon and penton) of HAdV-F40 and 41 (F40, F41) are evolving to escape cellular immune responses. Major histocompatibility complex (MHC) binding of viral peptides is a key step in the presentation of peptide-MHC complexes which activate the T-cell receptor and the cytotoxic T-cell response.
Methods:
Using global HAdV genomic data, we predicted MHC-peptide binding within the hexon and penton proteins of F40 and F41. We focused on MHC Class I alleles common in the UK and Kenya and identified predicted MHC Class I epitopes. Eight predicted epitope pairs from the F41 hexon were synthesized as 15-mer peptides, comparing the wildtype (1970 F41 reference) to the variant (2019-22) sequences. Cellular interferon gamma (IFN-γ) responses to these epitopes were measured in healthy donors using FluoroSpot assays.
Results:
We identified multiple predicted Class I epitopes shared between HAdV species C and F, but also unique to species F, and epitopes unique to each genotype. We show that IFN-γ and IL-2 (interleukin 2) peripheral blood mononuclear cell (PBMC) responses to HAdV-F are ubiquitous among healthy adult donors from Cambridge, UK. Among predicted Class I epitopes within the F41 hexon, 11/16 peptides elicited donor positive IFN-γ responses from healthy donor PBMC (at least one epitope from seven out of eight peptide pairs).
Conclusions:
The hexon and penton proteins of HAdV-F-40 and F41 are predicted to contain a number of genotype-specific, but conserved, Class I epitopes which could be used to inform future vaccine design. Using the hexon of F41 as a case study, we show that predicted T-cell epitopes in emergent strains are able to elicit an inflammatory cytokine response from healthy donor PBMC. The role of T-cell recognition in driving enteric adenovirus evolution deserves further consideration.
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