Structural brain MRI abnormalities in SCN1A-, SCN2A-, SCN3A-, and SCN8A-related epilepsies: a cohort study

Daewoong Ahn1, Daehyun Kim1, Hyeon Deok Sang2

  • 1Yonsei University College of Medicine, Seoul, Republic of Korea.

Frontiers in Neurology
|January 23, 2026
PubMed

Insights

Structural brain MRI abnormalities are common in SCN-related epilepsies, especially SCN2A and SCN8A types. These findings aid in diagnosing and understanding genetic epilepsy involving voltage-gated sodium channels.

Area of Science:

  • Neuroimaging
  • Genetics
  • Epilepsy

Background:

  • Genetic epilepsies involving voltage-gated sodium channels (SCN) are increasingly recognized.
  • Understanding the neuroimaging patterns associated with specific SCN gene mutations is crucial for diagnosis and management.
  • Previous assumptions may have underestimated the prevalence of structural brain abnormalities in these conditions.

Purpose of the Study:

  • To determine the frequency and types of structural brain MRI abnormalities in children with SCN1A, SCN2A, SCN3A, or SCN8A-related epilepsies.
  • To identify specific MRI features associated with different SCN gene mutations (genotype-specific patterns).

Main Methods:

  • Retrospective analysis of brain MRI scans from 139 pediatric patients with genetically confirmed SCN1A, SCN2A, SCN3A, or SCN8A pathogenic variants.
  • MRI findings were classified using a standardized framework.
  • Comparison of MRI abnormalities across different SCN genotypes.

Main Results:

  • Structural MRI abnormalities were present in 37.4% (52/139) of patients.
  • The most frequent abnormalities included atrophy (21.6%), hippocampal abnormalities (6.5%), and white matter signal abnormalities (5.0%).
  • Abnormalities were most prevalent in SCN2A (70.6%) and SCN8A (42.9%) epilepsy groups, contrasting with SCN1A (31.6%). Specific patterns were observed for each genotype, including cortical malformations in SCN2A and vascular abnormalities in SCN3A.

Conclusions:

  • Structural MRI abnormalities are more common in SCN-related epilepsies than previously thought, particularly in SCN2A and SCN8A-related forms.
  • Brain MRI findings can assist in the diagnosis, phenotypic classification, and prognosis of genetic epilepsies linked to voltage-gated sodium channel dysfunction.
  • Genotype-specific MRI patterns offer valuable insights into the underlying pathophysiology.
Abstract

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