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Targeting ZDHHC12-mediated PARP1 palmitoylation potentiates PARP inhibitor cytotoxicity
Xining Zhang1, Ye Liu2, Xingming Liao3
1Cancer Institute, The Second Hospital of Dalian Medical University, Dalian, China.
Abstract:
Poly(ADP-ribose) polymerase inhibitors (PARPi) elicit cytotoxicity by trapping PARP1 at DNA lesions, but clinical resistance remains a major challenge. Here, we identify reversible S-palmitoylation as a negative regulator of PARP1 chromatin engagement. Mass spectrometry reveals PARP1 palmitoylation at conserved cysteines within its DNA-binding domains. DNA damage reduces PARP1 palmitoylation, enhancing DNA binding, whereas inhibition of depalmitoylases APT1/2 elevates palmitoylation and suppresses DNA binding. The palmitoyltransferase ZDHHC12 catalyzes PARP1 palmitoylation, and its inhibition, along with the blockade of palmitate synthesis or global palmitoylation, augments PARP1 trapping and sensitizes high-grade ovarian cancer (HGSOC) cells to the PARPi Niraparib. Patient-derived PARP1 variants R138C and R591C display hyper-palmitoylation, impaired trapping, and PARPi resistance through an indirect mechanism independent of palmitoylation at the mutation sites. ZDHHC12 knockdown restores PARP1 trapping and resensitizes resistant cells and xenografts to Niraparib. These findings establish ZDHHC12-mediated PARP1 palmitoylation as a targetable vulnerability to overcome PARPi resistance.
Insights
Reversible S-palmitoylation regulates Poly(ADP-ribose) polymerase inhibitors (PARPi) by affecting PARP1 chromatin binding. Inhibiting ZDHHC12-mediated PARP1 palmitoylation overcomes PARPi resistance in ovarian cancer.
Area of Science:
- Biochemistry
- Molecular Biology
- Oncology
Background:
- Poly(ADP-ribose) polymerase inhibitors (PARPi) are crucial for cancer therapy by trapping PARP1 at DNA damage sites.
- Clinical resistance to PARPi remains a significant hurdle in treating cancers like high-grade serous ovarian cancer (HGSOC).
Purpose of the Study:
- To investigate the role of protein post-translational modifications in regulating PARP1 function and PARPi response.
- To identify novel targets for overcoming PARPi resistance.
Main Methods:
- Mass spectrometry to identify and localize PARP1 palmitoylation.
- In vitro assays to assess PARP1 DNA binding and trapping.
- Cellular and xenograft models of HGSOC to evaluate drug sensitivity.
- Genetic manipulation of palmitoyltransferases and depalmitoylases.
Main Results:
- PARP1 undergoes reversible S-palmitoylation at conserved cysteines in its DNA-binding domains.
- DNA damage decreases PARP1 palmitoylation, enhancing its chromatin engagement.
- The palmitoyltransferase ZDHHC12 catalyzes PARP1 palmitoylation; its inhibition enhances PARP1 trapping and sensitizes HGSOC cells to Niraparib.
- Patient-derived PARP1 variants exhibit resistance via a mechanism independent of direct mutation site palmitoylation.
Conclusions:
- Reversible S-palmitoylation acts as a negative regulator of PARP1 chromatin engagement.
- ZDHHC12-mediated PARP1 palmitoylation is a targetable vulnerability to overcome PARPi resistance in HGSOC.
- Targeting ZDHHC12 offers a potential strategy to resensitize resistant tumors to PARPi therapy.
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