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Optimizing machine learning-based multimodal radiomics for predicting IDH status in gliomas: A SHAP-based multicenter

Han-Wen Zhang1,2, Jia-Hua Cai3, Chun Luo2,4

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This study developed an interpretable machine learning model using multi-center MRI data to accurately predict isocitrate dehydrogenase (IDH) status in gliomas, improving preoperative diagnosis.

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GliomasSHAPdiffusion weighted imagingisocitrate dehydrogenasemachine learningperfusion weighted imagingradiomics

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Area of Science:

  • Neuroimaging
  • Machine Learning in Oncology
  • Radiomics

Background:

  • Predicting isocitrate dehydrogenase (IDH) status is critical for glioma management.
  • Conventional MRI (cMRI) has limitations; radiomics and machine learning (ML) face challenges with single-center data and interpretability.
  • There is a need for interpretable, multicenter ML models integrating diverse MRI sequences.

Purpose of the Study:

  • To develop and validate an interpretable, multicenter ML model for predicting IDH status in gliomas.
  • To integrate conventional MRI (cMRI) with functional sequences (DWI and PWI) for enhanced prediction.
  • To improve the clinical translation of ML models in neuro-oncology.

Main Methods:

  • Retrospective study with 180 patients from four institutions (150 training, 30 external test).
  • Radiomics features extracted from cMRI, DWI, and DSC-PWI (CBV maps).
  • Multiparametric MRI fusion radiomics models built using ML algorithms, with SHapley Additive exPlanation (SHAP) for interpretability.

Main Results:

  • The full-modality model (cMRI + DWI + PWI) with 3D modified segmentation achieved AUC of 0.840 (training) and 0.810 (external test).
  • Functional sequences significantly improved prediction accuracy compared to cMRI alone.
  • SHAP analysis identified key predictive features and provided individualized model explanations.

Conclusions:

  • The developed ML-SHAP model reliably predicts IDH status and demonstrates multicenter generalizability.
  • This interpretable tool integrates conventional and functional MRI for glioma management.
  • The model shows potential for supporting preoperative molecular diagnosis in gliomas.