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Probing Proximal Intramolecular Hydrogen Bonding Interactions on a Norbornane Scaffold
Carly A Rock1, Dakota B Green2, Martin J Flores2
1Oxford High School, Oxford, Mississippi 38655, United States.
The Journal of Physical Chemistry. A
|January 28, 2026
Summary
This study reveals that sulfur and phosphorus atoms can act as hydrogen bond acceptors, similar to oxygen and nitrogen. This finding expands the understanding of intramolecular hydrogen bonding in organic molecules.
Area of Science:
- Computational Chemistry
- Organic Chemistry
- Molecular Interactions
Background:
- Intramolecular hydrogen bonding plays a crucial role in molecular structure and properties.
- The scope of hydrogen bond acceptors in organic scaffolds is an area of ongoing research.
Purpose of the Study:
- To computationally investigate the potential of various functional groups to act as intramolecular hydrogen bond acceptors.
- To assess the strength and characteristics of hydrogen bonds formed between a hydroxyl (OH) donor and different acceptor atoms (F, Cl, Br, O, S, N, P) within a norbornane framework.
Main Methods:
- Systematic computational study using M06-2X and df-MP2 for geometry optimization.
- High-level single-point energy calculations with PNO-LCCSD(T)-F12.
- Analysis of structural, energetic, vibrational (IR spectroscopy), and electronic properties using Quantum Theory of Atoms in Molecules (QTAIM).
Main Results:
- Conformations with intramolecular OH···A hydrogen bonds exhibited lower electronic energies compared to non-bonded conformations.
- Significant red shifts in OH stretching frequencies and deshielding of the hydrogen atom in NMR spectra were observed for bonded conformations.
- QTAIM analysis confirmed the presence of hydrogen bonds, with electron densities typical for such interactions.
Conclusions:
- Sulfur (S) and Phosphorus (P) containing groups can effectively act as hydrogen bond acceptors, in addition to traditional N and O acceptors.
- The rigid norbornane scaffold facilitates the formation of stable intramolecular hydrogen bonds.
- These findings broaden the understanding of hydrogen bonding capabilities in diverse organic molecules.
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