MEP Pathway: First-Synthesized IspH-Directed Prodrugs with Potent Antimycobacterial Activity

Alizée Allamand1,2, Ludovik Noël-Duchesneau1, Cédric Ettelbruck1

  • 1Laboratoire Chimie et Biochimie de Molécules Bioactives, Université de Strasbourg/CNRS, UMR 7177, Institut Le Bel, 4 rue Blaise Pascal, 67081 Strasbourg, France.

Microorganisms
|January 28, 2026
PubMed

Insights

Researchers developed novel prodrugs targeting the IspH enzyme in the MEP pathway for treating tuberculosis. Chlorine-substituted compounds showed significant antimycobacterial activity, outperforming isoniazid.

Area of Science:

  • Medicinal Chemistry
  • Biochemistry
  • Microbiology

Background:

  • The 2-C-methyl-D-erythritol 4-phosphate (MEP) pathway is essential for bacterial survival.
  • Targeting the terminal enzyme, (E)-4-hydroxy-3-methylbut-2-enyl diphosphate reductase (IspH or LytB), offers a potential strategy for antimycobacterial drug development.
  • Prodrug strategies can enhance the delivery and efficacy of phosphorylated inhibitors.

Purpose of the Study:

  • To synthesize and evaluate novel IspH-directed prodrugs.
  • To investigate the impact of substituents on prodrug permeability and antimycobacterial activity.
  • To establish the efficacy of the cycloSaligenyl (cycloSal) prodrug approach for delivering phosphorylated inhibitors.

Main Methods:

  • Synthesis of alkyne and pyridine monophosphate cycloSal prodrugs with varying substituents (electron-withdrawing and donating).
  • Evaluation of prodrugs against Mycobacterium smegmatis using agar diffusion assays.
  • Assessment of structure-activity relationships, including amino acid-functionalized and mutual prodrug analogs.

Main Results:

  • Chlorine-substituted derivatives (5c and 6c) exhibited potent antimycobacterial activity against Mycobacterium smegmatis.
  • These compounds demonstrated superior activity compared to isoniazid in agar diffusion assays.
  • Electron-withdrawing substituents were found to accelerate prodrug hydrolysis and intracellular release of the active inhibitor.

Conclusions:

  • The study presents the first experimental evidence for an IspH-targeted prodrug approach.
  • The cycloSal prodrug strategy is effective for delivering phosphorylated inhibitors.
  • This work paves the way for developing novel antimycobacterial agents targeting the MEP pathway.

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