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Updated: Jan 29, 2026

Isolation of Soil Microorganisms Using iChip Technology
Published on: January 10, 2025
Planococcus circulans sp. nov., A Novel Bacterium Isolated from Kubuqi Desert Soil
Siqi Cui1, Siyue Zhang1, Ya Chen1
1Key Laboratory of Molecular Medicine and Biotherapy, School of Life Science, Beijing Institute of Technology, Beijing 100081, China.
Abstract:
A novel bacterial strain, designated as 4-30T, was isolated from a soil sample collected from the Kubuqi Desert in Inner Mongolia, northern China. The isolate was a Gram-stain-positive, aerobic, motile, and coccus-shaped bacterium, and its colonies were circular, opaque, convex, smooth, and orange-pigmented on Luria-Bertani agar. Phylogenetic analysis based on 16S rRNA gene sequences showed that strain 4-30T belonged to the genus Planococcus. Growth occurred at 4-38 °C (optimum, 25-28 °C), pH 6.0-11.0 (optimum, pH 9.0), and in 0-10% (w/v) NaCl (optimum, 1%). Strain 4-30T contained iso-C14:0, anteiso-C15:0, C16:1ω7c alcohol, and iso-C16:0 as major cellular fatty acids (>10%) and MK-7 and MK-8 as predominant menaquinones. Its polar lipid profile consisted of diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine, and two unidentified polar lipids. The genomic DNA G+C content was 45.9%. The average nucleotide identity (ANI) values between strain 4-30T and the closely related species were relatively low (ANIm < 85.6%, ANIb < 82.9% and OrthoANIu < 83.3%), and the digital DNA-DNA hybridization (dDDH) between strain 4-30T and type strains of the genus Planococcus were 20.0-26.7%. Based on phylogenetic, genotypic, chemotaxonomic, and phenotypic analyses, strain 4-30T is considered to represent a novel species of the genus Planococcus, for which the name Planococcus circulans sp. nov. is proposed. The type strain is 4-30T (=CDMCC 1.2409T = KCTC 43405T).
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