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Published on: December 23, 2022
Genomic Characterization of a Mycoplasma ovipneumoniae Strain from Hu Sheep in Inner Mongolia, China
Lingli Dai1, Na Wang1, Fan Zhang1
1Veterinary Research Institute, Inner Mongolia Academy of Agricultural and Animal Husbandry Sciences, Hohhot 010031, China.
Abstract:
Mycoplasma ovipneumoniae poses a major threat to sheep respiratory health, contributing to significant economic losses in farming communities. In this study, we isolated a novel strain, IM-DMQ, from a Hu sheep in Inner Mongolia that exhibited pulmonary adenomatous-like lesions, which is an uncommon pathological manifestation for this pathogen. The complete genome was sequenced using a hybrid Nanopore and Illumina approach, revealing a 1,039,804 bp circular chromosome with a GC content of 29.15%, encoding 1529 genes. Functional annotation highlighted genes involved in essential metabolic processes and potential virulence mechanisms. Comparative genomic analysis demonstrated that IM-DMQ shares the closest ancestry (ANI: 98.3%) with the Chinese strain NXNK2203, while structural variations and 14 unique genes distinguished it from other global strains. Furthermore, microbial community profiling of the original lung tissue revealed a co-infection background involving multiple bacterial pathogens, offering an etiological context for the severe disease presentation. These results provide the first complete genomic resource for an M. ovipneumoniae strain from Inner Mongolia associated with unusual pulmonary pathology, offering insights into its genetic diversity and supporting the future development of targeted diagnostics and vaccines for regional disease control.
Insights
A novel Mycoplasma ovipneumoniae strain from Inner Mongolia was sequenced, revealing unique genetic traits and potential virulence factors. This genomic data aids in understanding sheep respiratory disease and developing targeted control strategies.
Area of Science:
- Veterinary Microbiology
- Genomics
- Animal Pathology
Background:
- Mycoplasma ovipneumoniae is a significant pathogen causing respiratory disease in sheep, leading to economic losses.
- Uncommon pathological manifestations, such as pulmonary adenomatous-like lesions, highlight the need for further investigation into M. ovipneumoniae strains.
Purpose of the Study:
- To characterize a novel Mycoplasma ovipneumoniae strain (IM-DMQ) isolated from a Hu sheep in Inner Mongolia.
- To perform whole-genome sequencing and comparative genomic analysis of the IM-DMQ strain.
- To investigate the genetic basis of its pathogenicity and potential virulence factors.
Main Methods:
- Isolation and identification of Mycoplasma ovipneumoniae strain IM-DMQ from affected sheep.
- Whole-genome sequencing using a hybrid Nanopore and Illumina approach.
- Comparative genomic analysis with global M. ovipneumoniae strains and microbial community profiling.
Main Results:
- The complete genome of IM-DMQ was sequenced (1,039,804 bp, 29.15% GC content, 1529 genes).
- IM-DMQ shares high genomic similarity with the Chinese strain NXNK2203 (ANI: 98.3%) but possesses unique genes and structural variations.
- Co-infection with other bacterial pathogens was identified in the original lung tissue.
Conclusions:
- This study presents the first complete genome of an M. ovipneumoniae strain from Inner Mongolia associated with unusual pulmonary pathology.
- The genomic insights contribute to understanding the genetic diversity and evolution of M. ovipneumoniae.
- Findings support the development of targeted diagnostics and vaccines for controlling sheep respiratory disease in the region.
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