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Updated: Jan 29, 2026

Hybrid De Novo Genome Assembly for the Generation of Complete Genomes of Urinary Bacteria using Short- and Long-read Sequencing Technologies
Published on: August 20, 2021
Complete genome sequences of Staphylococcus aureus isolates with a novel sequence type from a patient with
Daniel B Amusin1,2, Sophia H Nozick1, Richard G Wunderink3
1Department of Microbiology-Immunology, Northwestern University Feinberg School of Medicine, Chicago, Illinois, USA.
Abstract:
The complete genome of a Staphylococcus aureus isolate causing hospital-acquired pneumonia was sequenced. Genetic changes in subsequent isolates (cultured 8, 20, and 22 days later) from the lungs of the patient were identified. The genome comprised a 2.74 Mb chromosome encoding 2,658 genes, representing a novel sequence type designated ST10248.
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