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Approaching a 0% False Positive Rate for PFAS Determination Leveraging Only MS1 Data.

David Schiessel1, Olivier Chevallier2, Michael Kummer1

  • 1Innovative Omics Inc., Sarasota, Florida 34235, United States.

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|January 30, 2026
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Summary
This summary is machine-generated.

This study enhances per- and polyfluoroalkyl substances (PFAS) identification using nontargeted liquid chromatography high-resolution tandem mass spectrometry (LC-HRMS/MS) analysis. New algorithms improve formula prediction accuracy, enabling better detection of unknown PFAS in environmental samples.

Keywords:
Kaufmann analysisKendrick mass defectLC-HRMSPFASformula predictionhomologous seriesnon-targeted analysissoftware

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Area of Science:

  • Environmental Chemistry
  • Analytical Chemistry
  • Mass Spectrometry

Background:

  • Per- and polyfluoroalkyl substances (PFAS) analysis commonly uses targeted liquid chromatography high-resolution tandem mass spectrometry (LC-HRMS/MS).
  • Targeted approaches identify less than 30% of PFAS, necessitating nontargeted strategies for broader coverage.
  • Identifying unknown PFAS in complex environmental matrices remains a significant challenge.

Purpose of the Study:

  • To expand the FluoroMatch Suite software for nontargeted PFAS analysis.
  • To leverage full-scan (MS1) data for enhanced formula prediction and Kaufmann analysis.
  • To improve the accuracy and coverage of PFAS identification in environmental samples.

Main Methods:

  • Development of an 11-step formula prediction algorithm and Kaufmann analysis with kernel density-based isoline cutoffs.
  • Integration of MS1 data into the FluoroMatch Suite for enhanced PFAS identification.
  • Implementation of a novel homologous series voting algorithm for formula prediction.

Main Results:

  • Application to AFFF-contaminated soil identified 179 PFAS-confirmed features.
  • Kaufmann analysis captured 94% of confirmed PFAS while removing 96% of non-PFAS features.
  • The homologous series voting algorithm achieved 0% false positive and 6% false negative rates in formula prediction.

Conclusions:

  • The expanded FluoroMatch Suite with MS1 data leveraging significantly enhances nontargeted PFAS identification capacity.
  • Novel algorithms provide highly accurate PFAS formula prediction, crucial for complex environmental matrices.
  • This approach improves the identification of unknown PFAS, addressing limitations of targeted methods.