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Updated: Jan 31, 2026

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An Allele-specific Gene Expression Assay to Test the Functional Basis of Genetic Associations
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Genetic Associations with Pectus Excavatum: A Systematic Review
Redoy Ranjan1, Nafiz Imtiaz2,3, Benjamin Waterhouse1,4
1Department of Cardiothoracic Surgery, James Cook University Hospital, Middlesbrough TS4 3BW, UK.
Current Issues in Molecular Biology
|January 30, 2026
Summary
Pectus excavatum (PE) genetics are poorly understood, with current evidence mainly from rare variants. Large-scale genome-wide association studies (GWAS) are needed to identify common genetic variants and clarify PE
Area of Science:
- Genetics
- Medical Genetics
- Congenital Disorders
Background:
- Pectus excavatum (PE) is the most common congenital chest wall deformity.
- Familial clustering suggests a genetic basis for PE, but its molecular underpinnings are unclear.
- This review synthesizes genetic variant evidence to inform future research.
Purpose of the Study:
- To systematically review existing genetic evidence for pectus excavatum.
- To identify genetic variants and pathways associated with PE.
- To guide future genome-wide association studies (GWAS) and Mendelian randomization (MR) analyses.
Main Methods:
- A systematic search of electronic databases (Google Scholar, PubMed, Web of Science, arXiv) was performed.
- Nine studies meeting inclusion criteria were analyzed, focusing on genetic associations, family-based studies, or mechanistic investigations.
- Study quality was assessed using the Newcastle-Ottawa Scale.
Main Results:
- No population-level GWAS for isolated PE were identified.
- Fourteen genetic loci were reported across diverse study designs, implicating pathways in extracellular matrix, TGF-β signaling, cartilage development, and transcriptional regulation.
- Crucially, no SNP-level data (effect sizes, allele frequencies, odds ratios) were reported, preventing MR analyses.
Conclusions:
- Current genetic data for PE predominantly comes from rare variants and family studies.
- A significant gap exists due to the absence of population-level GWAS.
- Large-scale international GWAS are urgently required to identify common variants and elucidate PE's genetic architecture.
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