Related Experiment Video
Updated: Feb 1, 2026

High-throughput Screening for Chemical Modulators of Post-transcriptionally Regulated Genes
Published on: March 3, 2015
ML Workflows for Screening Degradation-Relevant Properties of Forever Chemicals
Pranoy Ray1,2, Andrew R Castillo3, Manoj Kolel-Veetil4
1George W. Woodruff School of Mechanical Engineering, Georgia Institute of Technology, Atlanta, USA.
None:
The environmental persistence of per- and polyfluoroalkyl substances (PFAS) necessitates new remediation technologies, yet the vast chemical space makes traditional exploration methods for understanding degradation-relevant properties intractable. Rational design of PFAS degradation strategies requires accurate prediction of three critical molecular properties: bond dissociation energies (BDEs) to govern kinetics, polarizability to control catalytic interactions, and thermodynamic stability to govern reaction feasibility. Guided by theoretically-rooted principles, we identify that global properties (polarizability, stability) require spatially-informed features (3D electron density patterns), while bond-specific properties are governed by topological features (atomic connectivity). We developed two distinct physics-informed ML workflows implementing this principle: For global properties, two-point spatial correlations were compressed via Principal Component Analysis (PCA) and input to a Gaussian Process Regression (GPR) model. For local properties, a graph-based feature scheme was coupled with a Random Forest (RF) algorithm. Both workflows demonstrated strong predictive performance (GPR R2 ≈ 0.92 for polarizability; R2 ≈ 0.97 for enthalpy; RF R2 ≈ 0.87 for BDE) across multiple datasets, establishing robust Structure-Property linkages for PFAS. These physics-informed models provide a foundational capability for rapid, high-throughput screening of the vast PFAS library, enabling prioritization of candidate molecules and bonding motifs for subsequent experimental and process-level remediation studies, rather than constituting complete remediation workflows by themselves.
More Related Videos
09:04Identifying Per- and Polyfluorinated Chemical Species with a Combined Targeted and Non-Targeted-Screening High-Resolution Mass Spectrometry Workflow
Published on: April 18, 2019
06:25Author Spotlight: High-Throughput Toxicity Screening Using Zebrafish Embryo Startle Response Assay
Published on: January 12, 2024
Related Concept Videos
Physical and Chemical Properties of Matter
Urine: Physical and Chemical Properties
The concentration of these solutes varies, with urea being the most abundant nitrogenous waste product. Other solutes include sodium, chloride, potassium, phosphate,...
Regulated Protein Degradation
Protein degradation plays two important roles in the cells. It helps to protect cells from misfolded or damaged proteins before they lead to a...
Regulated Protein Degradation
Proteins: From Genes to Degradation
Transcription is the synthesis of RNA...
Proteins: From Genes to Degradation