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3D CSFA-UNet: a unified attention-driven deep learning framework for accurate knee MRI segmentation and
C Moorthy1, A Shafeek2, V Gurunathan2
1Dr. Mahalingam College of Engineering and Technology, Pollachi, Tamil Nadu, India. moorthyc@drmcet.ac.in.
Scientific Reports
|February 1, 2026
Summary
We developed a new AI framework for joint 3D knee MRI segmentation and classification, improving diagnostic accuracy and efficiency. This advanced model enhances clinical applicability for orthopaedic diagnostics.
Area of Science:
- Medical Imaging
- Artificial Intelligence
- Orthopaedics
Background:
- Current multi-task deep learning methods for joint segmentation and classification of 3D knee MRIs have limitations in clinical applicability.
- These limitations include restricted multi-scale context modeling, insufficient attention to spatial-channel cues, and high computational costs.
Purpose of the Study:
- To propose a unified, multi-stage framework for joint segmentation and classification of 3D knee MRI volumes.
- The goal is to improve diagnostic precision, interpretability, and efficiency for clinical applications.
Main Methods:
- The framework utilizes Gaussian Guided Filtering for noise suppression and boundary enhancement.
- A 3D CSFA-UNet (Channel-Spatial Feature Attention) with Atrous Spatial Pyramid Pooling (ASPP) is employed for segmentation.
- A Spiking Transformer network with Leaky Integrate-and-Fire (LIF) neurons and graph-attention layers is used for classification, preceded by a Desert Scorpion Feature Selector (DSFS) for feature selection.
- Hyperparameter tuning is performed using Falcon Hunting Optimisation (FHO).
Main Results:
- Segmentation performance achieved a Dice Similarity Coefficient (DSC) of 98.10%, Intersection over Union (IoU) of 96.26%, Average Surface Distance (ASD) of 0.45 mm, and 95th percentile Hausdorff Distance (Hd95) of 1.85 mm.
- Classification accuracy reached 99.15%, with precision of 98.82%, recall of 99.11%, and an F1-score of 99.04% on the OAI dataset.
- The model demonstrated robustness and reliability in both segmentation and grading tasks.
Conclusions:
- The proposed framework offers a clinically relevant, interpretable solution for joint segmentation-classification of 3D knee MRIs.
- This approach advances image-guided orthopaedic diagnostics by improving precision and efficiency.
- The study highlights the potential of this unified framework for enhanced diagnostic capabilities in clinical settings.
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