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NDC80 kinetochore complex component is a potential molecular target of adenoid cystic carcinoma
Xia Yan1, Sumei He2, Yuansheng Lin3
1Department of Oncology, Punan Branch of Renji Hospital, Shanghai Jiaotong University School of Medicine (Punan Hospital in Pudong), Shanghai 200125, P.R. China.
Abstract:
Adenoid cystic carcinoma (ACC) is a slow-growing malignant tumour that primarily originates from the major and minor salivary glands. The relationship between the NDC80 kinetochore complex component (NUF2) and ACC remains to be elucidated. The present study obtained gene expression information from the Gene Expression Omnibus database (GSE88804 and GSE153002). Differentially expressed genes were identified by using the 'limma' package in R. A protein-protein interaction network was constructed with the Search Tool for Retrieval of Interacting Genes/Proteins database and key genes were extracted using Cytoscape software. Analysis of differential expression levels of hub genes in tumour and normal tissue was performed using Tumour Immune Estimation Resource (TIMER) and GSE36820 profiles. Gene Ontology enrichment was subsequently analysed based on differences in NUF2 expression in tumour tissues. In addition, single sample Gene Set Enrichment Analysis (ssGSEA) was used for the quantitative analysis of immune cell infiltration in ACC. Western blotting and immunohistochemistry were used to assess NUF2 expression levels in tumour and adjacent non-tumour tissues. Small interfering RNA (siRNA) was used to decrease NUF2 expression in ACC cell lines. The biological functions of NUF2 were analysed using Cell Counting Kit-8 and wound healing assays. A total of 248 differential genes were identified by differential expression analyses, with 113 genes upregulated and 135 downregulated. A total of 7 hub genes, namely, CDK1, budding uninhibited by benzimidazoles 1 mitotic checkpoint serine/threonine kinase B, DNA topoisomerase II α, cyclin B2, NUF2, budding uninhibited by benzimidazoles 1 and centromere protein F, were obtained using the 'cytoHubba' plugin. The TIMER, standardized and GSE36820 databases revealed that the expression levels of NUF2 were higher in ACC tissues compared with normal tissue samples. Western blotting and immunohistochemical staining of ACC tissues provided evidence of NUF2 upregulation in ACC tissue compared with normal tissue. NUF2-related genes were enriched in 'ameboidal-type cell migration', 'collagen-containing extracellular matrix' and 'actin binding'. ssGSEA analysis revealed that the expression level of NUF2 was notably associated with activated CD4+ T cells, memory B cell and plasmacytoid dendritic cell. ACC cells transfected with NUF2 siRNA exhibited decreased proliferation and migration compared with the control. In conclusion, NUF2 is upregulated in ACC and is associated with immune cell infiltration. Functional studies demonstrated that NUF2 promotes ACC cell proliferation and migration, suggesting its potential as a therapeutic target for ACC.
Insights
NUF2 is upregulated in adenoid cystic carcinoma (ACC) and promotes tumor cell proliferation and migration. This finding suggests NUF2 as a potential therapeutic target for ACC, impacting immune cell infiltration.
Area of Science:
- Oncology
- Molecular Biology
- Immunology
Background:
- Adenoid cystic carcinoma (ACC) is a slow-growing malignancy primarily affecting salivary glands.
- The role of the NDC80 kinetochore complex component, NUF2, in ACC pathogenesis is not well understood.
Purpose of the Study:
- To investigate the expression and function of NUF2 in ACC.
- To explore the association between NUF2 and immune cell infiltration in ACC.
- To evaluate NUF2 as a potential therapeutic target for ACC.
Main Methods:
- Gene expression analysis using GEO datasets (GSE88804, GSE153002).
- Protein-protein interaction network construction and hub gene identification (Cytoscape, cytoHubba).
- Differential expression analysis (limma package, TIMER, GSE36820).
- Immune cell infiltration analysis (ssGSEA).
- In vitro validation using Western blotting, immunohistochemistry, siRNA, Cell Counting Kit-8, and wound healing assays.
Main Results:
- NUF2 was found to be significantly upregulated in ACC tissues compared to normal tissues.
- NUF2 expression correlated with increased proliferation and migration of ACC cells.
- NUF2 was associated with the infiltration of specific immune cells, including activated CD4+ T cells.
- NUF2-related genes were enriched in pathways associated with cell migration and extracellular matrix interactions.
Conclusions:
- NUF2 is a key upregulated gene in ACC, promoting tumor progression.
- NUF2 plays a role in immune cell infiltration within the ACC microenvironment.
- NUF2 represents a promising therapeutic target for adenoid cystic carcinoma treatment.
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