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Context-dependent adaptation in structured environments
Yuya Karita1,2, Gisela T Rodríguez-Sánchez2, Elisa Brambilla2
1Department of Physics, The University of Tokyo, Tokyo, Japan.
Proceedings. Biological Sciences
|February 3, 2026
Summary
Adaptive evolution requires ecological context. Ancestral bacteria facilitate the colonization of new niches by specialized mutants, demonstrating transient ecological dependencies shaping evolutionary trajectories.
Area of Science:
- Evolutionary biology
- Microbial ecology
- Systems biology
Background:
- Niche specialization is a common outcome of adaptive evolution.
- Ecological context and habitat structure significantly influence evolutionary trajectories.
- The air-liquid interface (ALI) is a high-oxygen niche often colonized by mat-forming bacteria.
Purpose of the Study:
- To investigate the role of ecological context in the colonization of the ALI niche by Pseudomonas fluorescens wrinkly spreader (WS) mutants.
- To determine if genetic adaptation alone is sufficient for successful niche colonization.
- To elucidate the interaction between ancestral and mutant bacterial types during niche establishment.
Main Methods:
- Co-culture experiments involving ancestral and WS mutant Pseudomonas fluorescens strains.
- Microscopy to visualize bacterial colonization and biofilm formation at the ALI.
- Computational simulations to model bacterial interactions and population dynamics.
Main Results:
- WS mutants, despite being genetically adapted specialists, often failed to colonize the ALI alone at low densities.
- Co-culture with ancestral types rescued WS mutant colonization by providing physical scaffolding at the ALI.
- Ancestral types facilitated the emergence and attachment of WS mutants, later dispersing to allow WS expansion.
Conclusions:
- Successful niche colonization by adaptive mutants can depend on ecological facilitation by non-specialized ancestral types.
- Transient asymmetric interactions between bacterial types are crucial for shaping evolutionary outcomes.
- The interplay between ecological context and genetic change is fundamental to understanding adaptive evolution in structured environments.
Keywords:
Pseudomonas fluorescensair–liquid interfacebacterial matexperimental evolutioninoculum effectspatial dynamicsstructured environmentMore Related Videos
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