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Context-dependent adaptation in structured environments.

Yuya Karita1,2, Gisela T Rodríguez-Sánchez2, Elisa Brambilla2

  • 1Department of Physics, The University of Tokyo, Tokyo, Japan.

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Summary
This summary is machine-generated.

Adaptive evolution requires ecological context. Ancestral bacteria facilitate the colonization of new niches by specialized mutants, demonstrating transient ecological dependencies shaping evolutionary trajectories.

Keywords:
Pseudomonas fluorescensair–liquid interfacebacterial matexperimental evolutioninoculum effectspatial dynamicsstructured environment

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Area of Science:

  • Evolutionary biology
  • Microbial ecology
  • Systems biology

Background:

  • Niche specialization is a common outcome of adaptive evolution.
  • Ecological context and habitat structure significantly influence evolutionary trajectories.
  • The air-liquid interface (ALI) is a high-oxygen niche often colonized by mat-forming bacteria.

Purpose of the Study:

  • To investigate the role of ecological context in the colonization of the ALI niche by Pseudomonas fluorescens wrinkly spreader (WS) mutants.
  • To determine if genetic adaptation alone is sufficient for successful niche colonization.
  • To elucidate the interaction between ancestral and mutant bacterial types during niche establishment.

Main Methods:

  • Co-culture experiments involving ancestral and WS mutant Pseudomonas fluorescens strains.
  • Microscopy to visualize bacterial colonization and biofilm formation at the ALI.
  • Computational simulations to model bacterial interactions and population dynamics.

Main Results:

  • WS mutants, despite being genetically adapted specialists, often failed to colonize the ALI alone at low densities.
  • Co-culture with ancestral types rescued WS mutant colonization by providing physical scaffolding at the ALI.
  • Ancestral types facilitated the emergence and attachment of WS mutants, later dispersing to allow WS expansion.

Conclusions:

  • Successful niche colonization by adaptive mutants can depend on ecological facilitation by non-specialized ancestral types.
  • Transient asymmetric interactions between bacterial types are crucial for shaping evolutionary outcomes.
  • The interplay between ecological context and genetic change is fundamental to understanding adaptive evolution in structured environments.