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Published on: February 6, 2020
Quality of life analysis in community pharmacy using deep learning and explainability methods.
María José Reyes-Medina1, María Del Pilar Carrera-González2,3, Vanesa Cantón-Habas1,2
1Department of Nursing, Pharmacology and Physiotherapy, Faculty of Medicine and Nursing, University of Córdoba, Córdoba, 14004, Spain.
Deep learning models effectively identified key factors impacting chronic disease patients' quality of life in community pharmacies. Pain, mobility, and mental health significantly influence patient outcomes, guiding personalized care.
Area of Science:
- Clinical Informatics
- Machine Learning in Healthcare
- Patient Quality of Life Research
Background:
- Chronic diseases pose a significant burden on patients' quality of life.
- Community pharmacies offer accessible settings for clinical data collection.
- Identifying key factors influencing quality of life is crucial for personalized chronic disease management.
Purpose of the Study:
- To develop and evaluate a deep learning model for processing clinical data from community pharmacies.
- To identify key variables influencing health-related quality of life in patients with chronic diseases.
- To utilize global and local explainability methods for model interpretability.
Main Methods:
- Analysis of data from 347 chronic patients with 257 variables.
- Comparison of five predictive models: Gradient Boosting, Random Forest, LightGBM, and fully connected neural networks (FCNNs).
- Application of SHapley Additive exPlanations (SHAP) for global variable importance and Local Interpretable Model-Agnostic Explanations (LIME) for local interpretation.
Main Results:
- A fully connected neural network (FCNN) ensemble achieved the highest performance (R² = 0.511 ± 0.126).
- Explainability analysis identified pain, mobility limitations, beta-blocker use, anxiety/depression, and daily living difficulties as key influential variables.
- Deep learning models successfully captured complex relationships among clinical and psychosocial variables.
Conclusions:
- Deep learning models, combined with SHAP and LIME, provide clinically interpretable insights for personalized chronic disease care.
- Community pharmacies are practical settings for collecting data and applying predictive models.
- Machine learning supports personalized decision-making in chronic disease management by identifying critical factors affecting quality of life.
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