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Published on: June 2, 2022
Multi-omics analysis: Gut microbial metabolites in ovarian lesions
Liu Yinghong1, Yang Xiaojuan1, Yang Xiaojuan1
1Department of Rheumatology and Immunology, Chongqing Emergency Medical Center/Chongqing Fourth People's Hospital/Affiliated Central Hospital of Chongqing University, China.
Abstract:
ObjectiveThis study aimed to systematically elucidate the role of gut microbial metabolites in the development and progression of ovarian cancer.MethodsPublic databases, including GutMgene, were used to screen and integrate gut microbial metabolite-target genes with ovarian cancer-related genes, ultimately identifying 59 key intersection genes. A gut microbiota-metabolite-gene regulatory network was constructed, and Gene Ontology and Kyoto Encyclopedia of Genes and Genomes enrichment analyses, protein-protein interaction network analysis, and evaluations of the drug-likeness and toxicity of key metabolites were performed.ResultsA total of 72 key genes associated with immune regulation were identified. Enrichment analyses demonstrated that these genes were significantly involved in immune-related processes, including T cell activation and the Toll-like receptor signaling pathway. Protein-protein interaction network analysis identified five core genes: STAT3, IL6, TNF, AKT1, and TP53. Drug-likeness analysis suggested that metabolites such as butyric acid and indole-3-propionic acid exhibit potential drug-like properties.ConclusionGut microbiota-derived metabolites may influence ovarian cancer progression and the immune microenvironment by regulating core genes such as TP53 and AKT1 and pathways including Toll-like receptor signaling. These findings provide a potential basis for microbiota-targeted interventions in ovarian cancer.
Insights
Gut microbial metabolites influence ovarian cancer by regulating immune responses and key genes like TP53 and AKT1. This research supports potential microbiota-targeted ovarian cancer therapies.
Area of Science:
- Oncology
- Microbiome Research
- Immunology
Background:
- Ovarian cancer progression is complex and influenced by the tumor microenvironment.
- The gut microbiome and its metabolites play a role in various cancers, including ovarian cancer.
Purpose of the Study:
- To systematically investigate the role of gut microbial metabolites in ovarian cancer development and progression.
- To identify key genes and pathways regulated by microbial metabolites in ovarian cancer.
Main Methods:
- Integrated gut microbial metabolite-target genes with ovarian cancer genes using public databases (e.g., GutMgene).
- Constructed a gut microbiota-metabolite-gene regulatory network.
- Performed Gene Ontology, Kyoto Encyclopedia of Genes and Genomes, and protein-protein interaction network analyses.
- Evaluated the drug-likeness and toxicity of key metabolites.
Main Results:
- Identified 72 key immune-related genes involved in T cell activation and Toll-like receptor signaling.
- Discovered core genes including STAT3, IL6, TNF, AKT1, and TP53.
- Highlighted potential drug-like properties of metabolites like butyric acid and indole-3-propionic acid.
Conclusions:
- Gut microbiota-derived metabolites can impact ovarian cancer progression and immunity.
- Regulation of core genes (e.g., TP53, AKT1) and pathways (e.g., Toll-like receptor signaling) by metabolites is a key mechanism.
- Findings suggest potential for microbiota-targeted interventions in ovarian cancer treatment.
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