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Updated: Feb 6, 2026

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Population and Single-Cell Analysis of Antibiotic Persistence in Escherichia coli
Published on: March 24, 2023
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Mapping single-cell responses to population-level dynamics during antibiotic treatment.
Kyeri Kim1,2, Teng Wang1,2, Helena R Ma1,2
1Department of Biomedical Engineering, Duke University, Durham, NC, USA.
Molecular Systems Biology
|February 5, 2026
Summary
Beta-lactam antibiotics cause bacterial filamentation and lysis. This study links single-cell lysis probabilities to population-level biomass dynamics, revealing universal parameters for bacterial antibiotic responses.
Area of Science:
- Microbiology
- Bacterial Physiology
- Antibiotic Resistance
Background:
- Beta-lactam antibiotics induce distinct population-level responses in sensitive bacteria, including transient biomass increases and linear growth-killing rate correlations.
- The mechanistic link between individual bacterial cell responses and these emergent population dynamics remains poorly understood.
Purpose of the Study:
- To elucidate how collective single-cell behaviors, specifically filamentation and lysis, contribute to observed population-level biomass changes during beta-lactam antibiotic treatment.
- To establish a quantitative relationship between single-cell lysis probability and filamentation extent.
Main Methods:
- Experimental observation of bacterial filamentation and lysis dynamics under beta-lactam antibiotic stress.
- Mathematical modeling to correlate single-cell lysis probabilities with population-level biomass dynamics.
- Experimental validation of model predictions.
Main Results:
- The probability of bacterial cell lysis increases sigmoidally with the degree of filamentation.
- This sigmoidal dependence is characterized by parameters specific to bacterial strain, antibiotic concentration, and growth conditions.
- A model successfully predicted population-level biomass dynamics from single-cell lysis probabilities, which were experimentally confirmed.
Conclusions:
- The study provides a mechanistic framework connecting single-cell lysis events to population-level biomass time-kill curves.
- This framework reveals universal parameters that can describe both individual cell and population responses to beta-lactam antibiotics.
- Understanding these dynamics offers insights into bacterial population behavior under antibiotic pressure.
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