Integrated network toxicology and molecular docking strategy elucidate ferroptosis mechanisms underlying acetyl

Wan-Jing Zheng1, Run Zhang2, Gui-Dan Wang1

  • 1Department of Anesthesiology, the Second Affiliated Hospital of Fujian Medical University, China.

Insights

Acetyl tributyl citrate (ATBC) exposure harms heart cells by triggering ferroptosis, a cell death pathway. This study identifies key targets like Caspase 8, IDH2, and MAPK14 involved in ATBC-induced cardiotoxicity.

Area of Science:

  • Biochemistry
  • Toxicology
  • Cardiology

Background:

  • Environmental pollutants like acetyl tributyl citrate (ATBC) pose risks to cardiac health.
  • Ferroptosis, a regulated cell death pathway, is increasingly recognized in toxicological outcomes.
  • Understanding ATBC's cardiotoxic mechanisms is crucial for public health.

Purpose of the Study:

  • To elucidate the cardiotoxic effects of ATBC.
  • To identify the molecular mechanisms underlying ATBC-induced cardiac damage, focusing on ferroptosis.
  • To pinpoint key molecular targets involved in ATBC cardiotoxicity.

Main Methods:

  • Bioinformatic analysis of databases (ChEMBL, STITCH, GeneCards, OMIM, FerrDb v2) to identify ATBC and ferroptosis-related genes.
  • Network analysis using STRING, cytoHubba, and Cytoscape to pinpoint core targets.
  • Gene Ontology and KEGG pathway enrichment analyses.
  • Molecular docking simulations (AutoDock) to assess ATBC binding affinity.
  • In vitro experiments using cardiomyocytes exposed to ATBC.

Main Results:

  • Identified 25 shared genes between ATBC-related targets and ferroptosis genes.
  • Pinpointed nine core targets, refined to three pivotal targets: Caspase 8, IDH2, and MAPK14.
  • Confirmed strong binding affinity between ATBC and core targets via molecular docking.
  • Demonstrated that ATBC impairs cardiomyocyte viability and activates ferroptosis in vitro.
  • Observed altered expression of Caspase 8, IDH2, and MAPK14 in ATBC-exposed cardiomyocytes.

Conclusions:

  • ATBC induces myocardial injury at the cellular level through ferroptosis.
  • Caspase 8, IDH2, and MAPK14 are key mediators of ATBC-induced cardiotoxicity.
  • Provides a framework for understanding ATBC's cardiac effects and developing countermeasures.

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