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Using the Chicken Chorioallantoic Membrane In Vivo Model to Study Gynecological and Urological Cancers
Published on: January 28, 2020
Superhuman performance on urology board questions using an explainable language model enhanced with European
M J Hetz1, N Carl1,2, S Haggenmüller1
1Digital Biomarkers for Oncology Group, German Cancer Research Center (DKFZ), Heidelberg.
Background:
Large language models encode clinical knowledge and can answer medical expert questions out-of-the-box without further training. However, this zero-shot performance is limited by outdated training data and lack of explainability impeding clinical translation. We aimed to develop a urology-specialized chatbot (UroBot) and evaluate it against state-of-the-art models as well as historical urologists' performance in answering urological board questions in a fully clinician-verifiable manner.
Materials And Methods:
We developed UroBot, a software pipeline based on the GPT-3.5, GPT-4, and GPT-4o models by OpenAI, utilizing retrieval augmented generation and the 2023 European Association of Urology guidelines. UroBot was benchmarked against the zero-shot performance of GPT-3.5, GPT-4, GPT-4o, and Uro_Chat. The evaluation involved 10 runs with 200 European Board of Urology in-service assessment questions, with the performance measured by the mean rate of correct answers (RoCA).
Results:
UroBot-4o achieved the highest RoCA, with an average of 88.4%, outperforming GPT-4o (77.6%) by 10.8%. Besides, it is clinician-verifiable and demonstrated the highest level of agreement between runs as measured by Fleiss' kappa (κ = 0.979). In comparison, the average performance of urologists on urological board questions is 68.7% as reported by the literature.
Conclusions:
UroBot is a clinician-verifiable and accurate software pipeline and outperforms published models and urologists in answering urology board questions. We provide code and instructions to use and extend UroBot for further development.
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