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Optimizing a tomato crocin biofactory by fine-tuning plant architecture.
Maria Lobato-Gómez1, Rafael Fernández-Muñoz2, Diego Orzáez1
1Instituto de Biología Molecular y Celular de Plantas, CSIC-Universidad Politécnica de València, Valencia, Spain.
Frontiers in Plant Science
|February 6, 2026
Summary
Genome editing tomato plants improved crocin production by modifying plant architecture. This resulted in higher yields and firmer fruits, making tomatoes a more sustainable biofactory for valuable metabolites.
Area of Science:
- Plant biotechnology
- Metabolic engineering
- Synthetic biology
Background:
- Tomato (Solanum lycopersicum) is a potential platform for producing high-value metabolites.
- Plant biofactories require chassis optimization for efficient metabolite accumulation.
- Previous work established the Tomaffron line for saffron apocarotenoid production.
Purpose of the Study:
- To optimize the tomato chassis for enhanced crocin production using genome editing.
- To investigate the impact of plant architecture modification on crocin yield and fruit quality.
Main Methods:
- CRISPR/Cas9 genome editing was used to target SELF-PRUNING (SP) and SP5G genes in the Tomaffron tomato line.
- The resulting sp sp5g double mutants were analyzed for growth habit, fruit yield, and crocin content.
Main Results:
- The sp sp5g double mutants displayed a compact growth habit and increased fruit yield.
- Total crocin content and fruit firmness were significantly higher in the double mutants.
- Crocin yield per square meter increased nearly fourfold compared to non-mutant controls.
Conclusions:
- Genome editing of plant architecture is an effective strategy for improving metabolite production in tomato biofactories.
- This approach offers a scalable and sustainable method for producing valuable compounds like crocin.
- Modified tomato plants show potential for competing with traditional sources like Crocus sativus in terms of yield and cultivation efficiency.
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