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Exploring the differences in the tumor microenvironment and immuno-oncologic targets in pancreatic ductal
1Division of Hematology, Oncology, and Transplantation, Department of Medicine, University of Minnesota, Minneapolis.
Background:
The majority of pancreatic ductal adenocarcinomas (PDACs) are driven by mutant (mt) KRAS. How mt KRAS and co-driver mutations affect the immune cell (IC) landscape of PDAC remains uncertain. Herein, we characterize the types of IC in the PDAC tumor microenvironment (TME) and the prevalence of immuno-oncologic (IO) biomarkers by genomic and transcriptomic analysis in the context of KRAS status.
Materials And Methods:
4142 PDAC and 3727 colorectal cancer (CRC) cases with KRAS mt were analyzed using next-generation DNA sequencing, immunohistochemistry, and whole-transcriptome RNA sequencing. Microsatellite instability and deficiency in mismatch repair (MSI-H/dMMR) and tumor mutational burden (TMB) were also assessed.
Results:
We found KRAS mt in 81% of PDAC, with the most common variant being G12D in PDAC, and fewer cases of KRAS mt were co-expressed with the predictive IO marker MSI-H/dMMR than KRAS-wild-type (wt). However, KRAS G12D , KRAS G12V , and KRAS Q61 mutations had significantly lower TMB than KRAS wt tumors in PDAC. The IC environment of KRAS mt PDAC showed significant differences in nearly all IC types; a similar pattern was observed in CRC but was less pronounced.
Conclusions:
Therapeutic IO targets like programmed death-ligand 1 are enriched in pancreatic adenocarcinoma cases harboring specific targetable variants of KRAS mt PDAC. Better understanding of the TME could lead to tailored immunotherapeutic strategies to overcome these barriers in KRAS mt PDAC, possibly in combination with molecularly targeted treatment strategies.
Insights
Mutant KRAS drives most pancreatic cancers, altering the immune cell landscape. Understanding these changes and biomarkers like MSI-H/dMMR can guide targeted immunotherapies for KRAS-mutant PDAC.
Area of Science:
- Oncology
- Cancer Genomics
- Immunology
Background:
- Pancreatic ductal adenocarcinoma (PDAC) is frequently driven by mutations in the KRAS gene.
- The impact of KRAS mutations and co-occurring mutations on the immune cell (IC) landscape within the PDAC tumor microenvironment (TME) is not fully understood.
- Characterizing immune cell infiltration and immuno-oncologic (IO) biomarkers in relation to KRAS status is crucial for developing effective treatments.
Purpose of the Study:
- To investigate the relationship between KRAS mutation status and the immune cell landscape in PDAC.
- To identify prevalent IO biomarkers in PDAC and correlate them with KRAS mutational status.
- To explore potential therapeutic strategies based on the genomic and transcriptomic profiles of PDAC.
Main Methods:
- Analysis of 4142 PDAC and 3727 colorectal cancer (CRC) cases using next-generation DNA sequencing.
- Assessment of whole-transcriptome RNA sequencing, immunohistochemistry, microsatellite instability (MSI-H/dMMR), and tumor mutational burden (TMB).
- Genomic and transcriptomic characterization of the PDAC TME in the context of KRAS status.
Main Results:
- KRAS mutations were found in 81% of PDAC cases, with G12D being the most common variant.
- KRAS-mutant PDAC showed significantly lower TMB compared to KRAS wild-type tumors.
- Distinct immune cell infiltration patterns were observed in KRAS-mutant PDAC compared to KRAS wild-type, with similar but less pronounced differences in CRC.
- The predictive IO marker MSI-H/dMMR was less frequent in KRAS-mutant PDAC than in KRAS wild-type.
Conclusions:
- Specific KRAS variants in PDAC are associated with unique immune cell microenvironments and TMB levels.
- Therapeutic IO targets, such as programmed death-ligand 1, are enriched in specific KRAS-mutant PDAC cases.
- Understanding the TME in KRAS-mutant PDAC is essential for developing tailored immunotherapeutic and molecularly targeted treatment strategies.
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