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Updated: Feb 7, 2026

Interactions with and Membrane Permeabilization of Brain Mitochondria by Amyloid Fibrils
Published on: September 28, 2019
Cathepsin-dependent amyloid formation drives mechanical rupture of lysosomal membranes
Delong Li1,2,3, Wenxin Zhang1,2, Michaela Medina4
1Mechanism of Cellular Quality Control, Max Planck Institute of Biophysics; 60438 Frankfurt am Main, Germany.
Abstract:
Lysosomal membrane integrity is essential for cellular homeostasis, and its failure drives lysosomal storage disorders (LSD) and neurodegeneration. The dipeptide L-leucyl-L-leucine methyl ester (LLOMe) is widely used to model lysosomal damage, yet its mechanism remains poorly understood. The prevailing view holds that LLOMe polymerizes into membrane-permeabilizing peptide chains within the lysosomal lumen. Using cryo-electron tomography in cultured cells and primary neurons, we visualized the structural basis of LLOMe-induced lysosomal damage. We reveal that LLOMe forms amyloid structures within lysosomes that directly interact with and rupture the limiting membrane through mechanical stress. In vitro reconstitution confirms this amyloid-mediated mechanism. These findings establish a structural paradigm for lysosomal membrane disruption and provide insights into how disease-relevant protein aggregates, implicated in neurodegeneration and LSD, may compromise lysosomal integrity.
Insights
L-leucyl-L-leucine methyl ester (LLOMe) forms amyloid structures inside lysosomes, directly rupturing the membrane via mechanical stress. This reveals a new mechanism for lysosomal damage relevant to neurodegeneration and storage disorders.
Area of Science:
- Cell Biology
- Biochemistry
- Neuroscience
Background:
- Lysosomal membrane integrity is crucial for cellular health, and its disruption contributes to lysosomal storage disorders (LSD) and neurodegeneration.
- L-leucyl-L-leucine methyl ester (LLOMe) is a common tool to induce and study lysosomal damage, but its precise mechanism of action is not well understood.
Purpose of the Study:
- To elucidate the structural mechanism by which LLOMe causes lysosomal damage.
- To investigate the role of amyloid formation in LLOMe-induced lysosomal membrane rupture.
Main Methods:
- Cryo-electron tomography was used to visualize LLOMe-induced damage in cultured cells and primary neurons.
- In vitro reconstitution experiments were performed to confirm the observed mechanism.
Main Results:
- LLOMe forms amyloid structures within the lysosomal lumen.
- These amyloid structures directly interact with and rupture the lysosomal membrane through mechanical stress.
- The findings were validated through in vitro reconstitution.
Conclusions:
- LLOMe-induced lysosomal damage is mediated by the formation of amyloid structures that cause mechanical rupture of the lysosomal membrane.
- This study establishes a structural paradigm for lysosomal membrane disruption.
- The findings offer insights into how disease-associated protein aggregates may impair lysosomal integrity in neurodegenerative diseases and LSDs.
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