Engineering chain-branched bispecific VHH complexes ("Dendrobodies") using SpyCatcher and SnoopCatcher pairings

Kota Kurogane1, Miyuu Sekine2, Ryutaro Asano2

  • 1Graduate School of Science and Engineering, Yamagata University, 4-3-16 Jyonan, Yonezawa, Yamagata, 992-8510, Japan.

Bispecific antibodies (bsAbs) that direct immune cells toward tumor cells have substantial therapeutic potential. However, bsAbs produced by tandemly linking single-domain antibodies (VHHs) often exhibit reduced activity because the N-terminal region of each VHH, which contains the complementarity-determining regions (CDR) loops, becomes sterically hindered by the adjacent domain. To address this issue, we developed a branched VHH complex architecture, termed Dendrobody, in which VHHs are joined through their C-terminal sides using orthogonal SpyCatcher/SpyTag and SnoopCatcher/SnoopTag systems. This design enables site-specific covalent assembly of multiple VHHs while preserving accessibility of their antigen-binding regions. We generated a bispecific anti-CD3/anti-EGFR Dendrobody (Dendrobody-CD3/EGFR) through a one-pot ligation of three recombinant components. The purified complex displayed correct folding with a thermal transition temperature (Tm) of 56 °C. Biolayer interferometry showed strong EGFR binding, and the Dendrobody triggered selective T-cell-mediated cytotoxicity toward EGFR-positive cancer cells. No cytotoxicity was detected in EGFR-negative cells, confirming antigen specificity. In addition, the platform allowed straightforward production of another variant, Dendrobody-CD16/EGFR, demonstrating its modularity. The Dendrobody framework thus offers an alternative strategy for constructing bispecific and multispecific VHH-based therapeutics with minimal steric interference and high functional adaptability.