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Methods for Generating and Evaluating Synthetic Longitudinal Patient Data: A Systematic Review.

Katariina Perkonoja1,2, Kari Auranen1,3, Joni Virta1

  • 1Department of Mathematics and Statistics, University of Turku, Turku, Finland.

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|February 9, 2026
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Summary
This summary is machine-generated.

Generating synthetic longitudinal patient data is crucial for healthcare research, but current methods lack privacy preservation and clear evaluation standards. Further development is needed for real-world application.

Keywords:
Data sharingLongitudinal patient dataPrivacy-preserving data publishingStatistical disclosure controlSynthetic data generation

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Area of Science:

  • Health Informatics
  • Data Science
  • Medical Research

Background:

  • Healthcare data utilization is hindered by privacy and security concerns.
  • Synthetic data generation offers a privacy-preserving alternative for sensitive patient information.
  • Longitudinal patient data aspects are underrepresented in existing synthetic data reviews.

Purpose of the Study:

  • To systematically review methods for generating and evaluating synthetic longitudinal patient data.
  • To identify challenges and gaps in current synthetic longitudinal patient data generation techniques.

Main Methods:

  • Systematic literature review following PRISMA guidelines.
  • Searched five databases up to May 2024.
  • Identified and analyzed 39 methods for synthetic longitudinal patient data generation.

Main Results:

  • Four methods addressed key challenges: temporal structure, variable types, missing values, and data imbalance.
  • Most studies evaluated data resemblance and utility; fewer assessed privacy.
  • No identified methods integrated privacy-preserving mechanisms, and effectiveness with small datasets is unclear.

Conclusions:

  • Current synthetic longitudinal patient data methods require enhancement for privacy and robust evaluation.
  • Standardized evaluation criteria and privacy-preserving mechanisms are essential for real-world applicability.
  • Future research should focus on privacy, evaluation frameworks, accessible code, and regulatory guidance.