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Updated: Feb 10, 2026

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Time-lapse Microscopy of Early Embryogenesis in Caenorhabditis elegans
Published on: August 25, 2011
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Clocks and Dominoes: Timing Mechanisms of Embryogenesis
Yonghyun Song1,2, Brian D Leahy3,4, Hanspeter Pfister5
1Simons Electron Microscopy Center, New York Structural Biology Center, New York, NY, USA.
Biorxiv : the Preprint Server for Biology
|February 9, 2026
Summary
Developmental timing in human embryos is regulated by distinct mechanisms. A domino model controls early cleavage, while a clock mechanism governs later stages, impacting IVF success.
Area of Science:
- Developmental Biology
- Reproductive Medicine
- Quantitative Biology
Background:
- Understanding developmental timing mechanisms is crucial for reproductive medicine.
- The clock and domino models are proposed mechanisms for regulating developmental stages.
- Distinguishing between these mechanisms in human development remains challenging.
Purpose of the Study:
- To develop a quantitative framework for distinguishing between clock and domino mechanisms in human pre-implantation development.
- To model the developmental rate of human embryos using large-scale imaging data.
- To investigate the association between developmental timing and clinical pregnancy outcomes.
Main Methods:
- Utilized a quantitative framework analyzing the correlation structure of developmental timings.
- Applied the framework to ~1 million images of 2946 human embryos from IVF.
- Developed mathematical models to describe embryonic developmental rates.
Main Results:
- A domino mechanism governs cleavage timings, consistent with cell cycle control.
- A pronuclei fade-triggered clock mechanism regulates morula and blastocyst stages.
- Clinical pregnancy association with cleavage timing is mainly patient-driven; embryo properties independently influence outcomes.
Conclusions:
- The study provides a robust framework for decoding developmental timing mechanisms.
- Distinct clock and domino mechanisms regulate different stages of human pre-implantation development.
- Findings have significant implications for both fundamental biology and clinical IVF practices.
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