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Genomic Characterization of Multidrug-Resistant Myroides Odoratimimus from Pneumonic Piglets: A One Health Threat
Binod Kumar Choudhary1, Mamta Choudhary2, Gyan Prakash Rai3
1Indian Council of Agricultural Research-National Institute of Biotic Stress Management, Baronda, Raipur, 493 225, Chhattisgarh, India. binods14@gmail.com.
Abstract:
Myroides odoratimimus is an emerging opportunistic pathogen increasingly implicated in infections across human and animal populations. We previously reported the first outbreak of pneumonia in post-weaning piglets associated with M. odoratimimus, marking a significant shift in its recognized host range. The affected swine herd exhibited co-infection with Porcine Circovirus types 2 and 3 (PCV2 and PCV3), likely contributing to proliferative dermatitis and nephropathy syndrome (PDNS), reproductive abnormalities and immunosuppression. This study presents the genomic characterization of a multidrug-resistant strain (M. odoratimimus pgdne) isolated during the outbreak. Whole-genome sequencing revealed multiple antimicrobial resistance determinants-including the chromosomally encoded blaMUS-1 metallo-β-lactamase-and several virulence-associated factors. Genotype-phenotype correlation demonstrated strong concordance. Phylogenetic analysis (distance method, 1,000 bootstrap replicates) showed close relatedness with human isolates, suggesting zoonotic potential. These findings underscore the pathogenic capacity of M. odoratimimus in immunocompromised animal hosts and highlight its relevance to public health and thereby reinforces the need for integrated One Health-based surveillance and control strategies targeting emerging multidrug-resistant pathogens.
Insights
Myroides odoratimimus causes piglet pneumonia and is multidrug-resistant. Its genomic analysis reveals zoonotic potential, emphasizing One Health surveillance for emerging pathogens.
Area of Science:
- Veterinary Microbiology
- Genomics
- Antimicrobial Resistance
Background:
- Myroides odoratimimus is an emerging opportunistic pathogen.
- Previously identified causing pneumonia in post-weaning piglets, expanding its host range.
- Co-infection with Porcine Circovirus types 2 and 3 (PCV2, PCV3) was noted in affected swine.
Purpose of the Study:
- To perform genomic characterization of a multidrug-resistant M. odoratimimus strain from a piglet pneumonia outbreak.
- To investigate antimicrobial resistance determinants and virulence factors.
- To assess the zoonotic potential of the M. odoratimimus strain.
Main Methods:
- Whole-genome sequencing of the M. odoratimimus pgdne strain.
- Identification of antimicrobial resistance genes (e.g., blaMUS-1) and virulence factors.
- Phylogenetic analysis using a distance method with 1,000 bootstrap replicates.
Main Results:
- The M. odoratimimus strain possessed multiple antimicrobial resistance determinants, including blaMUS-1.
- Several virulence-associated factors were identified, correlating with genotype and phenotype.
- Phylogenetic analysis indicated close relatedness to human isolates, suggesting zoonotic potential.
Conclusions:
- M. odoratimimus exhibits pathogenic capacity in immunocompromised animal hosts.
- The multidrug-resistant strain highlights public health relevance.
- Integrated One Health surveillance is crucial for controlling emerging multidrug-resistant pathogens.
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