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Cohort-Scale Spatial Autocorrelation for Tumor Prediction in Mid-Infrared Pathology and Spatial Biomarker Discovery

Miriam F Rittel1,2, Nikolas Ebert3, Denis Abu Sammour1

  • 1CeMOS Research and Transfer Center, Mass Spectrometry and Optical Spectroscopy, Technische Hochschule Mannheim, Mannheim, Germany.

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Summary

This study introduces a new method using spatial autocorrelation on mid-infrared (MIR) imaging to accurately classify cancer tissue types. This approach enhances automated annotation and biomarker discovery in heterogeneous cancers.

Keywords:
MALDI imagingcolorectal cancer liver metastasismass spectrometry imagingmid‐infrared imagingmultimodal correlative imagingspatial autocorrelation

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Area of Science:

  • Biomedical Imaging
  • Computational Pathology
  • Cancer Research

Background:

  • Mid-infrared (MIR) imaging offers label-free tissue classification but struggles with accurate annotation of heterogeneous cancers.
  • Current methods neglect spatial information and rely on time-intensive manual pathology for tumor identification.

Purpose of the Study:

  • To develop and validate a computational method for accurate tissue type annotation using MIR imaging.
  • To improve the efficiency and scalability of MIR imaging analysis for cancer diagnostics.
  • To explore multimodal imaging for novel cancer biomarker discovery.

Main Methods:

  • Spatial autocorrelation analysis applied to MIR projection images.
  • Random forest ranking to select relevant wavenumbers.
  • Interdependent data processing and hyperspectral tissue database referencing for annotation.
  • Correlation of MIR imaging with mass spectrometry imaging (MSI).

Main Results:

  • The method achieved high accuracy in computational tissue type annotation, matching manual pathology in a double-blind study of colorectal cancer liver metastases.
  • Spatial autocorrelation analysis improved annotation accuracy by considering spatial vicinity.
  • Multimodal imaging identified sphingomyelin isoforms as potential lipidomic tumor markers.

Conclusions:

  • Spatial autocorrelation analysis on MIR imaging data enhances automated annotation of heterogeneous cancer tissue morphologies.
  • This approach supports efficient and scalable analysis of large patient cohorts.
  • The study demonstrates the potential for discovering novel spatial cancer biomarkers through integrated imaging techniques.