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Behavioral dataset for Long-Evans and its schizophrenia-like substrain through several generations
Gábor Kőrösi1, Oliver Czimbalmos1, Gabriella Kekesi2
1Department of Computer Algorithms and Artificial Intelligence, Institute of Informatics, Faculty of Science and Informatics, University of Szeged, Szeged, Hungary.
We created a large dataset of rat behaviors using an automated system, capturing locomotor, exploratory, and cognitive functions. This resource aids in studying genetic and strain differences in behavior, with open data and scripts available.
Area of Science:
- Neuroscience
- Behavioral Science
- Genetics
Background:
- High-throughput behavioral analysis is crucial for understanding complex neurological conditions.
- Rodent models offer valuable insights into human brain disorders.
- Limited availability of comprehensive, standardized behavioral datasets hinders research.
Purpose of the Study:
- To present a high-throughput behavioral dataset for rodent models.
- To enable longitudinal and multivariate studies of behavioral phenotypes.
- To provide a benchmark for machine learning-based marker discovery.
Main Methods:
- Utilized Ambitus, an automated reward-based corridor system, for data acquisition.
- Recorded locomotor, exploratory activities, and cognitive functions in Long-Evans rats.
- Collected 91 raw and derived variables across four consecutive trials for 1,342 rats.
Main Results:
- Acquired a comprehensive behavioral dataset from a large cohort of rats, including a schizophrenia-like substrain.
- Ensured open availability of all data files, metadata, and analysis scripts on Zenodo.
- Established a valuable resource for comparative behavioral studies and computational neuroscience.
Conclusions:
- The Ambitus system provides a robust method for high-throughput behavioral phenotyping.
- The open dataset facilitates research into trans-generational effects and strain differences in behavior.
- This resource serves as a benchmark for developing and validating machine learning approaches in behavioral neuroscience.
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