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Updated: Feb 13, 2026

Using the E1A Minigene Tool to Study mRNA Splicing Changes
Published on: April 22, 2021
Aberrant mRNA splicing and impaired hippocampal neurogenesis in Grin2b mutant mice
Zohreh Farsi1, Ally Nicolella1, Sean K Simmons1,2
1Stanley Center for Psychiatric Research, Broad Institute of MIT and Harvard, Cambridge, MA, USA.
Abstract:
NMDA receptor dysfunction is implicated in the pathophysiology of autism spectrum disorder (ASD). Here, we investigated heterozygous mouse mutants carrying the ASD-linked C456Y mutation of Grin2b, a high-confidence ASD risk gene encoding the GluN2B subunit of NMDA receptors. Comprehensive transcriptomic analyses across brain regions and postnatal ages revealed large-scale gene expression changes, particularly in pathways related to oxidative phosphorylation and ribosome/translation, suggesting brain-wide alteration of energy metabolism and protein synthesis in Grin2b +/C456Y mice. We additionally discovered widespread splicing abnormalities and impaired hippocampal neurogenesis in Grin2b mutants. Interestingly, the underlying genes and the spatial and temporal patterns of transcriptomic changes in Grin2b +/C456Y mice differed substantially from those observed in mutant mice lacking Grin2a, encoding the GluN2A subunit of NMDA receptors and a schizophrenia risk gene. These findings underscore the distinct role of Grin2b in brain development and function and reveal potential mechanisms by which a lack of Grin2b may lead to neurodevelopmental disorders.
Insights
Investigating a specific mutation in the Grin2b gene, crucial for NMDA receptors, revealed widespread gene expression changes and impaired neurogenesis in mice, offering insights into autism spectrum disorder (ASD) mechanisms.
Area of Science:
- Neuroscience
- Genetics
- Molecular Biology
Background:
- NMDA receptor dysfunction is linked to autism spectrum disorder (ASD) pathophysiology.
- The Grin2b gene, encoding the GluN2B subunit, is a high-confidence ASD risk gene.
Purpose of the Study:
- To investigate the effects of the ASD-linked C456Y mutation in Grin2b on brain function.
- To explore the transcriptomic, splicing, and neurogenesis alterations in Grin2b mutant mice.
Main Methods:
- Utilized heterozygous mouse mutants with the Grin2b C456Y mutation.
- Conducted comprehensive transcriptomic analyses across brain regions and postnatal ages.
- Examined splicing patterns and hippocampal neurogenesis.
Main Results:
- Observed large-scale gene expression changes in oxidative phosphorylation and ribosome/translation pathways.
- Discovered widespread splicing abnormalities and impaired hippocampal neurogenesis.
- Found distinct transcriptomic patterns compared to Grin2a mutant mice.
Conclusions:
- Grin2b plays a distinct role in brain development and function.
- Alterations in Grin2b may contribute to neurodevelopmental disorders like ASD.
- Findings highlight potential mechanisms involving energy metabolism and protein synthesis disruptions.
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