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Updated: Feb 13, 2026

Measuring Mitochondrial Function of Naïve and Effector CD8 T Cells
Published on: March 28, 2025
Diverse Microbial Exposure Enhances CD8+ T Cell Effector Memory Output and Function
Claire E Thefaine1, Erin D Lucas1, Katharine E Block1
1Center for Immunology, Department of Laboratory Medicine and Pathology, University of Minnesota, Minneapolis, MN.
Abstract:
Mice with normalized microbial exposure (NME) harbor an immune system that more accurately reflects that of humans compared to mice maintained as specific pathogen-free (SPF). An explanation for the observed alterations in the composition of the T cell compartment in NME mice has not been reported. We compared the T cell landscape in NME versus SPF mice at baseline and after acute LCMV infection. Using the immgenT dataset, we found no unique T cell populations in NME, but the landscape shifted towards activated T cells with increased propensity for effector functions and improved pathogen clearance. CD8+ KLRG1+ cells (immgenT CD8_cl12) are significantly expanded in NME mice. Their predominance was a result of both increased formation and the conversion of other memory populations to a KLRG1+ phenotype. Thus, NME mice provide insight into a diverse T cell compartment rich with cells previously found to be limited in SPF mice.
Insights
Normalized microbial exposure (NME) mice show a more human-like immune system. NME mice exhibit an enhanced T cell response, improving pathogen clearance compared to specific pathogen-free (SPF) mice.
Area of Science:
- Immunology
- Microbiome Research
- Comparative Immunology
Background:
- Specific pathogen-free (SPF) mice have an immune system that differs from humans.
- Normalized microbial exposure (NME) mice offer a more human-relevant model.
- Alterations in the T cell compartment of NME mice are not well understood.
Purpose of the Study:
- To compare the T cell landscape in NME versus SPF mice.
- To investigate T cell responses at baseline and after viral infection (LCMV).
- To identify specific T cell populations that differ between NME and SPF mice.
Main Methods:
- Utilized the immgenT dataset for T cell profiling.
- Compared T cell populations in NME and SPF mice.
- Analyzed T cell responses before and after lymphocytic choriomeningitis virus (LCMV) infection.
Main Results:
- NME mice displayed a T cell landscape shifted towards activated effector cells.
- NME mice showed improved pathogen clearance compared to SPF mice.
- CD8+ KLRG1+ T cells were significantly expanded in NME mice due to increased formation and conversion.
Conclusions:
- NME mice possess a more diverse T cell compartment than SPF mice.
- The expanded CD8+ KLRG1+ T cell population in NME mice contributes to enhanced effector functions.
- NME mice serve as a valuable model for studying human-relevant T cell immunity.
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