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Updated: Feb 14, 2026

Incorporation of a Survivable Liver Biopsy Procedure in Mice to Assess Non-alcoholic Steatohepatitis NASH Resolution
Published on: April 16, 2019
Classification of liver tissue pathological changes via optical biopsy based on refractive index sensing
Kacper Cierpiak1, Sebastián García-Galán2, Jakub Czubek1
1Department of Optoelectronics, Faculty of Electronics, Telecommunications and Informatics, Gdańsk University of Technology, 11/12 Narutowicza Street, Gdansk, 80-233, Poland; Opto and Neurophotonics Laboratory, Faculty of Electronics, Telecommunications and Informatics, Gdańsk University of Technology, Gdańsk, Poland.
This study introduces a novel fiber-optic sensor for optical biopsy, using refractive index (RI) to classify liver tissue. Machine learning significantly improved diagnostic accuracy for distinguishing healthy, HCC-like, and metastatic tissues.
Area of Science:
- Biomedical Optics
- Medical Diagnostics
- Fiber Optic Sensing
Background:
- Optical biopsy offers minimally invasive tissue assessment but requires rapid, objective analysis.
- Compact sensors are crucial for clinical translation of optical biopsy techniques.
Purpose of the Study:
- To develop a refractive index (RI)-driven classification framework for optical biopsy using fiber-optic interferometry.
- To achieve accurate and explainable diagnostic signatures for liver tissue using machine learning.
Main Methods:
- Utilized an extrinsic fiber-optic Fabry-Pérot interferometric cavity to measure reflection spectra over a biologically relevant RI range (1.33-1.42).
- Defined three proxy classes (healthy, HCC-like, metastatic) based on literature-guided RI windows.
- Engineered 62 spectral descriptors and employed machine learning models (tree ensembles, SVM) and a fuzzy expert system for classification.
Main Results:
- Physics-only RI estimation achieved 0.70 accuracy and 0.48 macro-F1.
- Machine learning models significantly enhanced classification performance, with tree ensembles reaching a macro-F1 of 1.00.
- Feature attribution confirmed RI as the primary discriminative signal, with spectral visibility metrics improving robustness.
Conclusions:
- Machine learning-augmented fiber-optic interferometry provides accurate and explainable diagnostic signatures for optical biopsy.
- The developed framework supports the translational potential of RI-based optical biopsy for liver tissue analysis.
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