Machine Learning for MRI Classification of Systemic Lupus Erythematous Patients with and without Neuropsychiatric
Sebastiano Vacca1, Gianluca Chabert2, Matteo Piga3,4
1School of Medicine and Surgery, University of Cagliari, Cagliari, Italy.
Journal of Imaging Informatics in Medicine
|February 12, 2026
Summary
Machine learning models can now help diagnose Neuropsychiatric Systemic Lupus Erythematosus (NPSLE) and Systemic Lupus Erythematosus (SLE) using brain MRI scans. The Random Forest model achieved 90% accuracy, identifying key brain features for diagnosis.
Area of Science:
- Neuroimaging and Machine Learning
- Computational Medicine
- Neurology
Background:
- Systemic Lupus Erythematosus (SLE) is a complex autoimmune disease.
- Neuropsychiatric SLE (NPSLE) presents significant diagnostic challenges.
- Accurate diagnosis of NPSLE is crucial for timely and effective treatment.
Purpose of the Study:
- To develop a practical Machine Learning (ML) framework for diagnosing NPSLE and SLE.
- To utilize Magnetic Resonance Imaging (MRI) derived brain features for classification.
- To evaluate the performance of different ML models in distinguishing between NPSLE, SLE, and healthy controls.
Main Methods:
- A cross-sectional study included 27 SLE patients (14 NPSLE, 13 SLE) and 20 healthy controls.
- Brain structural features, specifically regional cortical thickness, were quantitatively assessed using the VolBrain online platform.
- Four ML models (Logistic Regression, SVM, Random Forest, XGBoost) were trained and tested using fivefold cross-validation.
Main Results:
- The Random Forest (RF) model achieved the highest performance with 90% accuracy on the test set.
- RF effectively classified between NPSLE, SLE, and control groups without regularization.
- Key features for classification included Precentral gyrus right thickness norm, angular gyrus thickness asymmetry, and Parietal thickness asymmetry.
Conclusions:
- The Random Forest algorithm shows significant potential as a clinical diagnostic support tool for NPSLE.
- Machine learning applied to MRI-derived features offers a promising avenue for improving NPSLE diagnosis.
- This framework can aid clinicians in differentiating NPSLE from SLE and healthy controls.
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