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Updated: Feb 14, 2026

Quantitative Analysis of the Cellular Lipidome of Saccharomyces Cerevisiae Using Liquid Chromatography Coupled with Tandem Mass Spectrometry
Published on: March 8, 2020
QTL mapping, breeding, and debugging Saccharomyces cerevisiae strains through Reiterated Mass Selection and
Lucas Souza de Bem1,2, Joneclei Alves Barreto1,3, Diego Trindade de Souza4
1Institute for Research in Bioenergy, São Paulo State University, Rio Claro, 13500-230, Brazil.
We developed Reiterated Mass Selection and backcrosSing (ReMaSSing) to improve yeast tolerance to lignocellulosic hydrolysates (LCHs). This method efficiently identifies adaptive alleles, enhancing yeast fermentation capabilities for biofuel production.
Area of Science:
- Biotechnology
- Yeast genetics
- Metabolic engineering
Background:
- Second-generation ethanol production from lignocellulosic hydrolysates (LCHs) is hindered by yeast fermentation inhibitors.
- Quantitative trait loci (QTL) mapping is crucial for identifying yeast alleles that enhance LCH tolerance.
- Current QTL mapping methods are labor-intensive and require extensive screening and breeding.
Purpose of the Study:
- To develop an efficient method for QTL mapping to identify adaptive alleles for LCH tolerance in Saccharomyces cerevisiae.
- To enhance the fermentation capabilities of yeast strains for industrial biofuel production.
Main Methods:
- Developed Reiterated Mass Selection and backcrosSing (ReMaSSing) for QTL mapping and strain improvement.
- Applied ReMaSSing to yeast populations derived from crossing stress-resistant and laboratory strains.
- Utilized whole-genome sequencing and bulked segregant analysis for QTL identification.
- Performed allele swapping and competition assays to validate identified QTL.
Main Results:
- ReMaSSing successfully identified key QTL linked to LCH tolerance, including alleles influencing growth and mitochondrial function.
- Selected yeast strains exhibited over 20% improvement in LCH tolerance and growth compared to parental strains.
- ReMaSSing facilitated the "debugging" of the laboratory strain background by purging detrimental variants.
- Developed improved yeast strains with enhanced LCH tolerance and xylose fermentation capabilities.
Conclusions:
- ReMaSSing provides a practical and efficient protocol for QTL mapping and the generation of improved yeast strains.
- Recombinant yeast populations derived from ReMaSSing demonstrate superior LCH tolerance and growth.
- ReMaSSing is a powerful tool for engineering industrial yeast strains with integrated desirable traits for biofuel production.
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