Related Experiment Video
Updated: Feb 14, 2026

Time-Lapse Epifluorescence Microscopy Imaging of Pseudomonas aeruginosa and Staphylococcus aureus Heterogeneous Phenotypes
Published on: February 14, 2025
Transcriptional Reprogramming of Staphylococcus aureus in Chronic Rhinosinusitis Reveals a Persistence-Associated
Lorena Tuchscherr1, Stefan Monecke2,3,4, Mateusz Jundzill5
1Institute of Medical Microbiology, Jena University Hospital, 07740 Jena, Germany.
Abstract:
Chronic rhinosinusitis (CRS) is a persistent inflammatory condition frequently associated with Staphylococcus aureus. The bacterium's ability to evade immune clearance and establish long-term infection complicates treatment. In our previous study, we demonstrated that S. aureus isolates obtained from patients with CRS (CRS-S. aureus isolates; CSS) exhibit reduced glycolytic activity and cytotoxicity, which is consistent with a persistence-associated phenotype. Here, we present transcriptomic evidence that supports this shift. Comparative RNA sequencing of CSS and control (S. aureus isolates from healthy carriers, MIN) isolates from healthy individuals revealed significantly lower expression of genes involved in canonical virulence pathways in CSS isolates, particularly during the early growth phase. These profiles suggest reduced acute virulence in favour of metabolic changes that aid survival in the chronically inflamed sinus. The distinct transcriptional state of CSS isolates might reflect the influence of the CRS host milieu in shaping bacterial behaviour. Host factors such as sustained inflammation or altered nutrient availability may select for persistence-associated phenotypes. Together, these findings advance our understanding of chronic S. aureus infection and may aid/guide the development of therapies aimed at disrupting persistence programmes or enhancing host resilience.
Insights
Chronic rhinosinusitis (CRS) bacteria show reduced virulence and altered metabolism, suggesting adaptation for long-term survival. This study reveals distinct bacterial gene expression linked to persistence in the CRS host environment.
Area of Science:
- Microbiology
- Immunology
- Genomics
Background:
- Chronic rhinosinusitis (CRS) is a persistent inflammatory condition often involving Staphylococcus aureus.
- Staphylococcus aureus isolates from CRS patients (CSS) display reduced glycolytic activity and cytotoxicity, indicating a persistence phenotype.
- Understanding bacterial adaptation in CRS is crucial for effective treatment.
Purpose of the Study:
- To investigate the transcriptomic differences between Staphylococcus aureus isolates from CRS patients and healthy carriers.
- To identify specific gene expression patterns associated with bacterial persistence in the CRS environment.
Main Methods:
- Comparative RNA sequencing was performed on CSS isolates and control isolates (MIN) from healthy individuals.
- Gene expression profiles were analyzed, focusing on virulence and metabolic pathways.
Main Results:
- CSS isolates exhibited significantly lower expression of genes involved in canonical virulence pathways compared to MIN isolates, especially during early growth.
- Transcriptomic profiles suggest a shift towards metabolic adaptations supporting survival in the chronically inflamed sinus.
- Distinct transcriptional states indicate potential host-driven selection for persistence phenotypes.
Conclusions:
- Staphylococcus aureus in CRS patients adopts a distinct transcriptional state characterized by reduced acute virulence and enhanced metabolic strategies for persistence.
- The CRS host environment likely influences bacterial behavior, selecting for phenotypes that promote long-term survival.
- Findings provide insights into chronic Staphylococcus aureus infections and potential therapeutic targets for disrupting persistence.
Related Concept Videos
Transcription
Transcription is the process of synthesizing RNA from a DNA sequence by RNA polymerase. It is the first step in producing a protein from a gene sequence. Additionally, many other proteins and regulatory sequences are involved in the proper synthesis of messenger RNA (mRNA). Regulation of transcription is responsible for the differentiation of all the different types of cells and often for the proper cellular response to environmental signals.
Transcription Can Produce Different Kinds...
Transcription
Transcription Can Produce Different Kinds of RNA Molecules
In eukaryotes,...
Transcription Factors
Eukaryotic Transcription Inhibitors
Eukaryotic transcription inhibitors usually contain two distinct domains, a...
Eukaryotic Transcription Activators
The binding domains are capable of recognizing and interacting with regulatory sequences on the DNA. These...
Master Transcription Regulators

