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Pediatric NTRK-rearranged gliomas: A clinicopathological and molecular analysis of six cases
Jing Zhao1, Feng Tian1, Di Ding1
1Department of Pathology, Children's Hospital of Fudan University, National Children's Medical Center, Shanghai, China.
Aims:
Neurotrophic tyrosine receptor kinase (NTRK) gene fusions, although present in fewer than 2 % of gliomas, are recognized oncogenic drivers. With the approval of NTRK-targeted therapies, increasing attention has focused on these tumors, as targeted treatments may substantially enhance outcomes. This study aimed to characterize the pathological features and molecular diversity of pediatric NTRK-rearranged gliomas to inform targeted therapeutic strategies.
Methods And Results:
We analyzed six pediatric gliomas harboring NTRK fusions, identified through next-generation DNA sequencing (n = 5) and fluorescence in situ hybridization (n = 6). All tumors were supratentorial, involving the cerebral hemispheres (n = 3), thalamus (n = 2), and pineal region (n = 1). All infantile cases (n = 3) demonstrated high-grade histology and predominantly involved NTRK1, with one NTRK3 fusion. The three low-grade gliomas included two with NTRK1 and one with NTRK2 rearrangement. Dual gene fusions were identified in one case with intrachromosomal BCAN exon 14-NTRK1 exon 11 and NTRK1 exon 8-ARHGEF11 exon 2 rearrangements. One case harbored triple gene fusions, including interchromosomal ETV6-NTRK3 and PHYH-ETV6 fusions and an intrachromosomal NTRK3 rearrangement. Additional genetic alterations were detected in three cases, involving CDKN2A/B, TP53, ROS1, ABL1, MSH2, ARID4A, and CHEK1. DNA methylation profiling showed no collective methylation class and low-confidence matches to established methylation families.
Conclusion:
This study expands the clinicopathological and molecular spectrum of pediatric NTRK-rearranged gliomas, including rare entities and complex fusion patterns, and supports routine NTRK testing in pediatric gliomas irrespective of histological grade.
Insights
Pediatric gliomas with neurotrophic tyrosine receptor kinase (NTRK) gene fusions show diverse pathological and molecular features. Routine NTRK testing is recommended for all pediatric gliomas to guide targeted therapies.
Area of Science:
- Oncology
- Genetics
- Pediatric Medicine
Background:
- Neurotrophic tyrosine receptor kinase (NTRK) gene fusions are oncogenic drivers in a small percentage of gliomas.
- Targeted therapies for NTRK-rearranged tumors offer improved outcomes, increasing focus on these rare malignancies.
Purpose of the Study:
- To characterize the pathological and molecular diversity of pediatric NTRK-rearranged gliomas.
- To inform the development of targeted therapeutic strategies for these tumors.
Main Methods:
- Analysis of six pediatric gliomas with NTRK fusions using next-generation DNA sequencing and fluorescence in situ hybridization.
- Histopathological evaluation and DNA methylation profiling.
Main Results:
- All analyzed tumors were supratentorial, with varying histological grades and NTRK gene involvement (NTRK1, NTRK2, NTRK3).
- Complex dual and triple gene fusions were identified, alongside additional genetic alterations in some cases.
- DNA methylation profiling did not reveal distinct methylation classes.
Conclusions:
- This study expands the known clinicopathological and molecular spectrum of pediatric NTRK-rearranged gliomas.
- Complex fusion patterns and rare entities were observed.
- Routine NTRK testing in pediatric gliomas, regardless of grade, is supported to facilitate targeted treatment.
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