Related Experiment Video
Updated: Jul 15, 2026

Quantitative Fundus Autofluorescence for the Evaluation of Retinal Diseases
Published on: March 11, 2016
Automated Nonperfusion Quantification in Diabetic Retinopathy on Ultra-Widefield Swept-Source OCT Angiography
Tai Yong Loh1, Juling Sia1, Wei Hing Seah2
1Lee Kong Chian School of Medicine, Nanyang Technological University, Singapore.
Purpose:
To evaluate the performance of a customized deep learning algorithm for automated segmentation of nonperfusion area (NPA) on ultra-widefield swept-source OCTA (UWF SS-OCTA) and its utility in diabetic retinopathy (DR) severity assessment.
Design:
Cross-sectional study.
Subjects:
A total of 180 eyes from 122 participants representing all grades of DR severity.
Methods:
We developed a convolutional neural network based on a multiscale U-Net backbone with squeeze-and-excitation attention for segmentation of NPAs on en face SS-OCTA all-retinal-layer images from 3 scan patterns: 6 × 6 mm, 12 × 12 mm, and 29 × 24 mm. Ground-truth annotations of NPAs and nongradable area (NGA) on en face OCTA images were generated by 2 independent graders and adjudicated by a vitreoretinal specialist. A corresponding en face structural OCT image was incorporated to distinguish true NPAs from shadow artifacts. Segmentation outputs included NPA, NGA, and shadow artifacts. Pixel-level accuracy was assessed with the F1 score. Nonperfusion index (NPI) was defined as NPA/gradable area. The level of agreement between human-labeled and algorithm-predicted NPI was analyzed using Bland-Altman analysis.
Main Outcome Measures:
Algorithm F1 score and NPI.
Results:
The algorithm for NPA segmentation achieved a mean F1 score of 0.82 ± 0.01 in 6 × 6 mm, 0.84 ± 0.03 in 12 × 12 mm, and 0.83 ± 0.02 in 29 × 24 mm, with no significant difference across fields of view (P = 0.12). Algorithm-derived NPI strongly agreed with expert grading (intraclass correlation coefficient >0.979). Both human- and algorithm-derived NPI increased progressively with increased DR severity in all scan patterns demonstrated by the Kruskal-Wallis test (6 × 6 mm: human: P = 0.02; algorithm: P = 0.03; 12 × 12 mm: algorithm P < 0.001; human P < 0.001; 29 × 24 mm: algorithm: P < 0.001; human: P < 0.001) with the largest magnitude of increase in 29 × 24 mm scans. The algorithm for foveal avascular zone segmentation also achieved a mean F1 score of 0.88 ± 0.05 for 6 × 6 mm images and 0.85 ± 0.05 for 12 × 12 mm images.
Conclusions:
This deep learning algorithm was validated on single-scan UWF SS-OCTA for automated NPA segmentation and quantification. It demonstrates high accuracy and scalability across multiple scan sizes, supporting its potential integration into objective DR OCTA biomarker analysis.
Financial Disclosures:
Proprietary or commercial disclosure may be found in the Footnotes and Disclosures at the end of this article.
More Related Videos
07:18Evaluation of Capillary and Other Vessel Contribution to Macular Perfusion Density Measured with Optical Coherence Tomography Angiography
Published on: February 18, 2022
08:54Author Spotlight: Understanding Age-Related Macular Degeneration Pathophysiology with QAF Workflow
Published on: May 26, 2023