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Affinity Purification of Influenza Virus Ribonucleoprotein Complexes from the Chromatin of Infected Cells
Published on: June 3, 2012
Dual roles of USP39 in stabilizing PB2 and orchestrating ribonucleoprotein assembly drive H5 influenza virus
Hui Yang1, Yurui Dong2, Ying Bian2
1College of Veterinary Medicine, Yangzhou University, Yangzhou, Jiangsu 225009, China; Jiangsu Co-Innovation Center for the Prevention and Control of Important Animal Infectious Disease and Zoonoses, Yangzhou, Jiangsu 225009, China; Jiangsu Key Laboratory of Zoonosis, Yangzhou University, Yangzhou, Jiangsu 225009, China; Joint International Research Laboratory of Agriculture and Agri-Product Safety, the Ministry of Education of China, Yangzhou University, Yangzhou, Jiangsu 225009, China; Jiangsu Research Centre of Engineering and Technology for Prevention and Control of Poultry Disease, Yangzhou, Jiangsu 225009, China; Jiangsu Interdisciplinary Center for Zoonoses and Biosafety, Yangzhou University, Yangzhou 225009, China.
Abstract:
Host cells combat avian influenza virus (AIV) infection by targeting viral polymerase PB2 for degradation, yet how the virus counteracts this remains elusive. In this study, we analyze the host proteins interacting with H5 AIV PB2 and identify USP39 as a deubiquitinase with dual functions in viral replication. Catalytically, USP39 directly deubiquitinates PB2 at lysine 660 (K660), preventing its degradation and sustaining polymerase activity. In parallel, independently of enzymatic activity, USP39 promotes PB2-PB1 association, facilitating formation of ribonucleoprotein (RNP) complexes. These complementary functions amplify viral RNA synthesis, dampen host antiviral responses, and drive efficient viral replication. Consistently, a PB2 K660R substitution enhances viral replication in vitro and increases pathogenicity in mice. Our findings reveal a mechanism by which AIV hijacks USP39 to circumvent host ubiquitination, facilitate RNP biogenesis, and identify USP39 as a promising therapeutic target for broadly effective antivirals against pandemic-prone H5 viruses.
Insights
Avian influenza virus (AIV) evades host defenses by hijacking USP39, a protein that prevents viral polymerase degradation and aids replication. This discovery offers a new target for developing antivirals against H5 AIV.
Area of Science:
- Virology
- Molecular Biology
- Immunology
Background:
- Host cells target avian influenza virus (AIV) polymerase PB2 for degradation as an antiviral defense.
- The viral mechanisms to counteract PB2 degradation and sustain replication were previously unclear.
Purpose of the Study:
- To identify host proteins interacting with H5 AIV PB2.
- To elucidate the role of USP39 in AIV replication and host immune evasion.
Main Methods:
- Co-immunoprecipitation to identify host proteins interacting with H5 AIV PB2.
- Biochemical assays to assess USP39's deubiquitinase activity and its effect on PB2.
- In vitro viral replication assays and in vivo pathogenicity studies in mice.
Main Results:
- USP39 was identified as a deubiquitinase that directly deubiquitinates H5 AIV PB2 at K660, preventing its degradation.
- USP39 also promotes PB2-PB1 association, independent of its enzymatic activity, facilitating ribonucleoprotein (RNP) complex formation.
- A PB2 K660R substitution mutant enhanced viral replication and mouse pathogenicity.
Conclusions:
- AIV hijacks USP39 to counteract host ubiquitination, sustain polymerase activity, and facilitate RNP biogenesis.
- USP39 plays a dual role in amplifying viral RNA synthesis and dampening host antiviral responses.
- USP39 represents a potential therapeutic target for developing broad-spectrum antivirals against pandemic-prone H5 viruses.
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