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Advances in the designing endoplasmic reticulum-targeted fluorescent probes
Merve İnel1, Ayse Yildirim2, Bahadir Ozturk1
1Department of Medical Biochemistry, Faculty of Medicine, Selçuk University, Selçuklu, 42031, Türkiye.
Bioorganic Chemistry
|February 19, 2026
Summary
This review organizes endoplasmic reticulum (ER) fluorescent probes by targeting strategy and structure, aiding research into ER function and disease. It covers six functional groups for monitoring ER health and pathology.
Area of Science:
- Cell Biology
- Biochemistry
- Molecular Imaging
Background:
- The endoplasmic reticulum (ER) is crucial for protein folding, lipid metabolism, and calcium homeostasis.
- ER dysfunction is linked to diseases like cancer, neurodegenerative disorders, and metabolic conditions.
- Fluorescent probes are advancing molecular imaging of ER physicochemical parameters and biological processes.
Purpose of the Study:
- To systematically review and organize ER-targeted fluorescent probes.
- To categorize probes based on targeting strategy and structure-activity relationships.
- To provide a framework for understanding probe utility in ER research and disease contexts.
Main Methods:
- Literature review and synthesis of existing research on ER-targeted probes.
- Classification of probes into six functional groups based on targeting and structure.
- Analysis of structure-activity relationships for probe design and application.
Main Results:
- Probes are categorized into six functional groups: peptide-linked, enzyme-specific, ROS-sensitive, viscosity-sensitive, morphology/identity probes, and disease-specific biosensors.
- The review emphasizes targeting strategies and structure-activity relationships for probe development.
- This organization complements existing classifications based solely on probe type or analyte.
Conclusions:
- A structured understanding of ER-targeted probes based on targeting and structure is essential for advancing ER research.
- These probes offer powerful tools for monitoring ER function, dysfunction, and disease.
- This classification facilitates the rational design and selection of probes for specific biological questions and therapeutic applications.
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