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We introduce a neural network model for inferring epidemic states, incorporating node covariates for more realistic initial conditions. This approach enhances state recovery, though phase transitions can create a statistical-to-computational gap.

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Area of Science:

  • Complex Systems
  • Statistical Inference
  • Machine Learning

Background:

  • Stochastic processes on graphs model epidemics, but often assume random initial states.
  • Real-world systems have node covariates influencing initial states, a factor often ignored in inference.

Purpose of the Study:

  • To model the initial state of stochastic processes on graphs as a neural network function of node covariates.
  • To develop a Bayesian inference framework that leverages both process dynamics and covariate information.
  • To analyze the impact of neural network priors on state and trajectory recovery.

Main Methods:

  • A hybrid belief propagation and approximate message passing (BP-AMP) algorithm was derived.
  • The algorithm integrates spreading dynamics with information from node covariates.
  • Performance was compared against methods using only spreading or only covariate information.

Main Results:

  • The proposed model enhances the recovery of initial states and spreading trajectories by incorporating covariate information.
  • First-order phase transitions were observed in some regimes, particularly with Rademacher distributed neural network weights.
  • A statistical-to-computational gap emerged where perfect recovery is theoretically possible but computationally unachievable.

Conclusions:

  • Integrating neural network priors based on node covariates improves inference for stochastic processes on graphs.
  • Phase transitions and the resulting statistical-to-computational gap present challenges for accurate state estimation.
  • The BP-AMP algorithm offers a robust approach to handling complex inference problems with integrated covariate information.