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Updated: Feb 24, 2026

Spatial Separation of Molecular Conformers and Clusters
Published on: January 9, 2014
Wavelet Transform-Based Clustering Decoding the Dynamical Properties of Single Molecular Junctions
Dongjie Li1, Haoyu Wang1, Xin Zuo1
1Institute of Modern Optics, Center of Single-Molecule Sciences, Tianjin Key Laboratory of Micro-scale Optical Information Science and Technology, Nankai University, Tianjin 300350, China.
Abstract:
The ability to precisely identify the dynamic properties of tunneling molecular junctions is crucial for establishing functional molecular devices. However, the minor signals and events are normally obscured by the dominant signals/events. To this end, we put forward an unsupervised clustering method, which achieved 100% classification accuracy with a simulated data set. Applying it to analyze the conductance traces of dithiothreitol molecular junctions, we uncovered that the molecular dimer junctions can highly likely be formed via both S-S bonding and hydrogen bonding, which is extremely difficult to be distinguished by only experimental approaches. For aromatic molecules, we revealed that stable trimer junctions might be formed, and such trimer junctions tend to change configuration upon the reversed bias, a property that was completely masked by the traditional conductance histogram analysis. Beyond molecular electronics, this work provides an automated method to catch small-probability events and reveal the unique properties hidden in a large amount of data.
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