Related Experiment Video
Updated: Feb 24, 2026

Synthesis of Wavelength-shifting DNA Hybridization Probes by Using Photostable Cyanine Dyes
Published on: July 6, 2016
A novel cyan-emitting fluorescent α-amino acid: synthesis, photophysical characterization and live-cell imaging
Aakash Gupta1, Bing Yan1, Yu Hsiang Cheng1
1Department of Chemistry and Biochemistry, UMass Cranberry Health Research Center, University of Massachusetts Dartmouth 285 Old Westport Road Dartmouth MA 02747 USA mguo@umassd.edu.
Abstract:
Small-molecule-based fluorescent probes, particularly fluorescent analogs of α-amino acids (FAAs), have become valuable tools for labeling proteins of interest and visualizing biological processes in living cells. In this study, we report the design, synthesis, and characterization of a novel cyan-emitting fluorescent α-amino acid, 4-dibenzothiophen-4-yl-l-phenylalanine (DBT-FAA). DBT-FAA was synthesized in good yield via a facile 3-step procedure involving modified Suzuki-Miyaura cross-coupling and characterized by spectroscopic methods. The compound exhibits strong fluorescence in a broad range of aqueous and polar solvents, with a major emission peak at ∼424-445 nm and secondary shoulders at longer wavelengths (∼448-583 nm), along with a high quantum yield (Φ = 0.74 in DMSO at λ ex = 380 nm and λ em = 400-800 nm). DBT-FAA also demonstrates excellent photostability, showing strong resistance to photobleaching under aqueous conditions, which is essential for prolonged live-cell imaging. Confocal fluorescence microscopy confirmed that DBT-FAA is efficiently taken up by human HeLa cells, likely through an endocytic pathway, without observable cytotoxicity under the conditions studied. Once inside the cells, DBT-FAA initially accumulates in lysosomes and subsequently translocates to mitochondria with extended incubation time, suggesting dynamic intracellular redistribution. The robust optical properties, photostability, and cellular compatibility of DBT-FAA highlight its potential as a versatile fluorescent amino acid probe for real-time visualization of intracellular processes, offering promising applications in studying protein dynamics, molecular interactions, and cellular metabolism relevant to biochemistry, drug discovery, and protein engineering.
More Related Videos
11:51Engineering 'Golden' Fluorescence by Selective Pressure Incorporation of Non-canonical Amino Acids and Protein Analysis by Mass Spectrometry and Fluorescence
Published on: April 27, 2018
14:02Optimizing the Genetic Incorporation of Chemical Probes into GPCRs for Photo-crosslinking Mapping and Bioorthogonal Chemistry in Live Mammalian Cells
Published on: April 9, 2018
Related Concept Videos
Protein Dynamics in Living Cells
Fluorescent recovery after photobleaching (FRAP) is a fluorescent-protein-based detection technique used to quantify protein movement rates within the cell. This method exposes a small portion of the cell to an intense laser beam. The laser beam causes permanent photobleaching of the fluorophore-tagged proteins in the exposed region. As the bleached...
Reporter Genes