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Updated: Feb 26, 2026

Modeling the Functional Network for Spatial Navigation in the Human Brain
Published on: October 13, 2023
The genetic landscape of human functional brain connectivity
Bernardo de Apc Maciel1, Marijn Schipper1, Cato Romero2
1Department of Complex Trait Genetics, Center for Neurogenomics and Cognitive Research, Amsterdam Neuroscience, Vrije Universiteit Amsterdam, Amsterdam, the Netherlands.
Common genetic variants significantly influence functional brain connectivity across the connectome. These genetic factors impact brain organization, cognitive function, and overall health, highlighting shared genetic effects throughout the brain.
Area of Science:
- Neuroscience
- Genetics
- Brain Imaging
Background:
- Understanding the genetic basis of functional brain connectivity is crucial for insights into brain health and disease.
- Individual differences in brain circuitry are influenced by genetic variations.
Purpose of the Study:
- To investigate the genetic architecture of functional brain circuitry using a large-scale dataset.
- To identify specific genes and biological pathways associated with functional brain connectivity.
Main Methods:
- A mass-univariate approach was employed to analyze functional brain circuitry in 28,159 subjects.
- High spatial resolution data (82 brain regions) were used to examine 3321 inter-regional functional pathways.
Main Results:
- Common genetic variants explained individual differences in 33% of functional pathways.
- 72 significant genetic associations revealed widespread, pleiotropic effects across the brain's connectome.
- Associations were linked to five genes (PAX8, EphA3, SLC39A12, THBS1, APOE) involved in neurodevelopment, cardiovascular, and cognitive processes.
Conclusions:
- The genetic component of functional brain connectivity differences is broadly shared across the brain.
- Genetic variation plays a significant role in large-scale brain organization.
- These findings underscore the importance of genetic factors in cognitive function and overall health.
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